| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1178 |
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| Symbol | panB |
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| ID | 6161721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1261525 |
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| End bp | 1262394 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663932 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001790212 |
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| Protein GI | 171057863 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.311826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAGTC ACGCTGAACC GACCCCGGTG GCCCGCAACC GCAAGCCACT CACCCTTCCC
GCCCTGCGTG CGATGCAGCA GCGCGGCGAG AAGATCGCCA TGCTGACGGC CTACGAAAGC
ACGCTGGCGC GCGTGGCCGA CGAGGCCGGC GTCGACACCA TCCTGGTCGG CGACTCGCTC
GGCATGGTCG TGCAGGGCCA CGCCAGCACC CTGCCCGTCA CGCTCGACGA GATGGCCTAT
CACACCCGCT GCGTCGCCCG CGGCCTGCAG GGCGGCGCGG CCTGGCTGGT CGCCGACCTG
CCGTTCGCGA GCTACCACCA GGGCCCGTCG CAGGCGATGG CCGCCGCCGC CACGCTGATG
CAGGCCGGCG CACAGATGAT CAAGCTCGAA GGCGGCGGCT GGACCGCCGA GACGGTGCGC
TTCCTGGTCG AACGCGGCGT GCCGGTCTGT GCCCACCTCG GCCTGACGCC GCAGAGCGTG
CACGCGCTGG GCGGCTATCG CATCCAGGGC CGCGACGAAG CAGGCGCCGC CGAACTGCGC
CGCCAGGCCA CCGAGCTGAC CCAGGCCGGC GCCGCGATGA TGGTGCTCGA ACTGATGCCC
TCGGCGGTAG CCGCGGCGGT GCAGGCCGAC AACCCGCAGC TGATGACGAT CGGCATCGGC
GCCGGCCCGG CCACCGCCGG CCAGGTGCTG GTGGTGCACG ACATGCTGGG CCTGACACGC
GGCAAGCTGC CGCGCTTCGT GCGCAACTTC ATGCACAGCG AGGCGGGCCA GAACCTGTCG
GTCGAAGACG CGATCCGCGC CTACGTGGCC GCCGTCAAGG ACGCCAGCTT CCCCGACCCC
GTGGCCCACG CCTACGCCAG CGCCAGCTGA
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| Protein sequence | MSSHAEPTPV ARNRKPLTLP ALRAMQQRGE KIAMLTAYES TLARVADEAG VDTILVGDSL
GMVVQGHAST LPVTLDEMAY HTRCVARGLQ GGAAWLVADL PFASYHQGPS QAMAAAATLM
QAGAQMIKLE GGGWTAETVR FLVERGVPVC AHLGLTPQSV HALGGYRIQG RDEAGAAELR
RQATELTQAG AAMMVLELMP SAVAAAVQAD NPQLMTIGIG AGPATAGQVL VVHDMLGLTR
GKLPRFVRNF MHSEAGQNLS VEDAIRAYVA AVKDASFPDP VAHAYASAS
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