| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1128 |
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| Symbol | |
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| ID | 6163742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1207448 |
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| End bp | 1208965 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663882 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790162 |
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| Protein GI | 171057813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.541844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC GCGCCACCCG ATCCGCCCCG ACCGCCATGA CCCTGCTCGC GGCAGCCCTG
GCCTGCGCGC CCGCCGTCGG CTCGGCGCAG TTGCGCCTGA GCGGCGAGCT GCCGCAGTCT
CAGCCCTGCC CGGCCGCGCT GCCCGCCGGC AGCACCTGCC TGGCCGGGCG CGACTACCTC
GGCGCCTCGG TCTGGCTGGC GAAACCGGCG CAGTGGAACG GCCAGCTGAT CGTGTTCGCG
CACGACGGCT CCGATCTGGC CGAGCCCGGC CCCGCGCGCA GCCGGCAGGA CCTGTCGCGC
TGGGCCGTCT GGCTGCAGGC CGGCTACGGC TGGGCGGGCT CGTCGTACCG CCAGGGCGGG
CTCGAGATGC AGGCTGCGGT CGACGACACC GAGCGCGCCC GCCAGGCCTG GGTGGCGGAG
TTCGGCGCGC CGCAGCGCAC GCTGCTGCAC GGCCACGGCT GGGGCGCAGG CGTGGCCACC
CACGTGGCCG CGCGCTACAC CACGCCCGAT CTGCACCCGC GCCGCCCCGG CACCGGCCGG
CCGCCGTATG ACGCGCTGCT GCTGAGCAAC GGCGTGCTGG TCGGCGCCGG CCGCGCCTAC
GACGGCTGGC TCGACCTGCG CGTGGTCTAC CAGGCGGTCT GCAACAACCA CCCGCGCCCC
GACGAGCCCG TCTACCCGCT GTGGATGGGC CTGCCGCCGG CCGGCAGCGG CCAGGCCGGC
CTGACGCGAG CCGAACTGGC GCAGCGGGTC GAGGCCTGCA CGGGGCTGTC GAAGCCGCCC
GGCCAGCGCA GCGCCGCGCA GCGCCAGGCC CTGCAGACGC TGACCGGCGT CACCCGCATC
CCCGAGAGCG CCGTGCAGAC GCTGCTGGCC GACGCCACCT GGCAGTTCCA GGACATCGTC
TGGCGCAAGC TCAAGGGCAA GAATCCGTTC GGCAACGAGG GCGTGCGCTA CACCGGATCA
GGCGACGACG AGGCGCTGAA CCGCCAGGTG CCGCGCTACG TGTCCGACCC GGCGGCACGC
GCCGCCCTGG CCGACGACAC CGATCCGGCC ACGCGCCTGA ACCTGCCGGT GCTGACGCTG
CACGCCGTGC GCGACCCGAT CGCGCCGGTC GAATACGAAA CCGAGTTCCG CCGCGTGCTG
GCCGAGGTCG GCAATGCCGG ACGCCTGCTG CAGCTCTACA CCGACGACGA TGCGCACGAC
GGCATCACCG ATGCGCAGGC GCTGAGCGCC GCGGCGGCGC TGTCGGACTG GCTCGACCAG
CAGAAGATGC CGCTGCCCGC CGACGTCGCC GACACCTGCC GGCAGCTCGC GCCGCGCTGG
AAACCGGCCA GCGACTGCCG CTACCTGAGC CGCTACCAGA ACGCACCGCT GGCCAGCCGG
GTGAGCGAGC GGCAGCGCGA AACGGTGCCG TCGCTGGTGA AGGGATCGGG GCCGGCCGTC
ATGCTGCCGG CTGCTGCTGC CGTGGCACCT GCCGTACCGG CAGCACCGGC GCCCGGGCCA
GCCTCGGCGC CGCGTTGA
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| Protein sequence | MNTRATRSAP TAMTLLAAAL ACAPAVGSAQ LRLSGELPQS QPCPAALPAG STCLAGRDYL
GASVWLAKPA QWNGQLIVFA HDGSDLAEPG PARSRQDLSR WAVWLQAGYG WAGSSYRQGG
LEMQAAVDDT ERARQAWVAE FGAPQRTLLH GHGWGAGVAT HVAARYTTPD LHPRRPGTGR
PPYDALLLSN GVLVGAGRAY DGWLDLRVVY QAVCNNHPRP DEPVYPLWMG LPPAGSGQAG
LTRAELAQRV EACTGLSKPP GQRSAAQRQA LQTLTGVTRI PESAVQTLLA DATWQFQDIV
WRKLKGKNPF GNEGVRYTGS GDDEALNRQV PRYVSDPAAR AALADDTDPA TRLNLPVLTL
HAVRDPIAPV EYETEFRRVL AEVGNAGRLL QLYTDDDAHD GITDAQALSA AAALSDWLDQ
QKMPLPADVA DTCRQLAPRW KPASDCRYLS RYQNAPLASR VSERQRETVP SLVKGSGPAV
MLPAAAAVAP AVPAAPAPGP ASAPR
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