| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1089 |
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| Symbol | |
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| ID | 6161516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1161778 |
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| End bp | 1163154 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663843 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790123 |
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| Protein GI | 171057774 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACC CCCAAGATCT GATGGATTCC CCCGCCCCGA AACGCGTGCT CGTCATCGGC
GCGGGCCCTG CCGGGCTGAT GGCCGCCGAG GCGTTGGCCG AGGCCGGCGT GCAGGTCGAT
GTCTGCGATG CCATGCCGTC GGTGGGTCGC AAGTTCCTGC TCGCCGGCAA GGGCGGGCTG
AACCTCACGC ATGCCGAGAA CGCCGAGTCG TTTCTCGGCC GCTATCGTGA ACATGCGTCG
GCGGTCGCGC CCTGGCTCGA AGCCTTCGGG CCGGCTGCCA TCCGTGACTG GGCCGCCGGG
CTGGGTGTGA GCACCTTCGT CGGCAGCTCT GGCAAGGTCT TTCCCGAAGG CATGAAAGCC
GCACCCTTGC TGCGCGCCTG GCTGCGCCGC CTGCGCGCCC AGGGCGTGCG CCTGCACATG
CGGCATCGCT GGACCGGCGG GCTGGCGGTT CGACTCGCAC CACCCGACGG GCCTGATGCC
ACCGACGCCG TGCAGGGCTG GACGGTCGAT TTCGAGACGC CGAAAGGGCC GGTGCAACGG
CATGCCGACG CGGTGCTGCT GGCGCTGGGG GGTGGCAGCT GGGCCCGGCT CGGGTCCGAT
GGTGCGTGGG TGCCGTGGCT GCGCCAACGC GGCGTGGCCG TGGCAGCGTT GCAGCCCGCC
AATTGCGGTT TCGACATCGG CTGGAGCGCG CATGTCGCCG AGCGTCACGC CGGCACGCCG
TTGAAGAACG TCGTGCTGCG ACTGGCCTCC GAAATGGCTG CGGAGGGTGG CACGACTGCA
CCACGATTCG AGCGCCTGGG CGAGGCCGTG ATCACGGCCA CCGGCATCGA AGGCAATCTC
GTCTATGCCG CATCCGGCCT GTTGCGCGAG GCCATCGCGG CGCACGGCCA TGTCGATGTC
AGGCTCGATC TGCTGCCGCA GCGCAGTGAA GCCGACCTGG TCACCGCGCT GGCTCGCGGC
CGTGGCAGCC GCTCGTGGCC GAACCATATG CGTGAACAGA CCGGCCTTGC CGGCGCTCAG
GCGGCGCTGC TGCGTGAAGG GCTCGATGCT GCCGCCTGGA TGCGACTTCA GCACGATGCT
GCGGCGCTGG CGCACCGCAT CAAGGCCCTG CCGCTGCGAC TGCTCGCGCC ACGCCCGATC
GACGAGGCGA TCAGCACGGC GGGTGGCGTG GCACTGCCGC CCGAAGCCGC TGGCGTCGAC
GAGCGCCTGA TGCTGAGTGC CCTGCCGGGC GTGTACTGCG CCGGCGAGAT GCTCGGCTGG
GATGCGCCGA CGGGTGGCTA TCTGCTCACC GCCTGTCTGG CGAGCGGTCG CTGGGCGGCG
CGCTCGATGC TGGCGCGCTG GGGCCTGTCC GTGCCGGCCA TTGCCGTGTC GAGCTGA
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| Protein sequence | MSNPQDLMDS PAPKRVLVIG AGPAGLMAAE ALAEAGVQVD VCDAMPSVGR KFLLAGKGGL
NLTHAENAES FLGRYREHAS AVAPWLEAFG PAAIRDWAAG LGVSTFVGSS GKVFPEGMKA
APLLRAWLRR LRAQGVRLHM RHRWTGGLAV RLAPPDGPDA TDAVQGWTVD FETPKGPVQR
HADAVLLALG GGSWARLGSD GAWVPWLRQR GVAVAALQPA NCGFDIGWSA HVAERHAGTP
LKNVVLRLAS EMAAEGGTTA PRFERLGEAV ITATGIEGNL VYAASGLLRE AIAAHGHVDV
RLDLLPQRSE ADLVTALARG RGSRSWPNHM REQTGLAGAQ AALLREGLDA AAWMRLQHDA
AALAHRIKAL PLRLLAPRPI DEAISTAGGV ALPPEAAGVD ERLMLSALPG VYCAGEMLGW
DAPTGGYLLT ACLASGRWAA RSMLARWGLS VPAIAVSS
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