| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1049 |
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| Symbol | |
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| ID | 6163462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1117895 |
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| End bp | 1118392 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663803 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_001790083 |
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| Protein GI | 171057734 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGG TCACGCGCAT CCTGATGGTG TGCATGGGCA ACGTCTGCCG CTCGCCGACC
GCCGAGGTGG TGCTGCGCCA GCGCGTCGAG CAGGCCGGGC TGAGCCATCG CATCGAGATC
GACTCGGCCG GCACGCACGC CTCGAACAGT GCCGCACAGC CGCCCGACGA GCGCAGCGTC
GCCCATGCGG CGCGGCGCGG CTACGACCTG CTGTCGGTGC GGGCGCGGCG TGTCACGTCG
GCCGACTACG AGACTTTCGA CCTGATCCTG GCGATGGACG AGGACAACCT GTCCAACCTC
CGGAGCACCT GTCCGCCCGA ACACCGCCAC AAGCTCCGGC TGATGATGAG CTACGCCCCG
GCGCGTGCGC CGCGCGTGAT CCCCGACCCC TACTACGGCG CAGCCGCCGG CTTCGAGTGG
GTGCTGGACC TGATCGAGGC CGCATGCGAT GGCTTGATCG TCGAGCTGGG TGCATCATCG
GGTTTCCCGA ACAGGTGA
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| Protein sequence | MSGVTRILMV CMGNVCRSPT AEVVLRQRVE QAGLSHRIEI DSAGTHASNS AAQPPDERSV
AHAARRGYDL LSVRARRVTS ADYETFDLIL AMDEDNLSNL RSTCPPEHRH KLRLMMSYAP
ARAPRVIPDP YYGAAAGFEW VLDLIEAACD GLIVELGASS GFPNR
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