| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1011 |
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| Symbol | |
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| ID | 6160136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1081216 |
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| End bp | 1082655 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663761 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_001790047 |
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| Protein GI | 171057698 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA TCAGTTCCGC CGGGATCGGC AGCGGCCTGG ACGTCAGTTC GATCGTCACG
CAGCTCATGG CGGTGGAGAA ATCCCCGCTG CAGCAGATGC AGACGGAGGC CAGCAAGATC
CAGAGCAAGC TCAGCGCGTA CGGCAAGGTC CAGAGTTACG TGTCGGCGCT GCGCGATGCG
GCGCTCAATC TCACCAAGTC GGACACCTGG GGTTCCACCA CCGCCAGCTC GGGCGACGCG
AGCGTCTTCA CCGCCACCAC CGCATCCGGG GCCACGGCGG GCAACTACAG CCTGACCGTG
CAGCAGATGG CCAGCGCGCA GACGGTGGCG TCGGCGGCCT GGCCGGCCTC GGTGTCGACC
GTCGGCTCGG GCGTGCTGCG GCTCGAACTG GGCACCTGGG CGGCCGGGCA GACCGGCTTC
ACGCCCAAGA GCGGCACCTC CAGCGTCGAC GTGACCGTGG CTGCCAGCGA CACCCTGGCC
GACGTGCGCG ACAAGATCAA CGCCGCCAAG TCGGGCGTGA TGGCGTCGAT CGTCAACGAC
ACCTCGGGCT CGCGCCTGGT GCTGCGCTCG AGCGAGACCG GCGCCGAGAA CGCGTTCCGC
GTCACCGCCA CCGATGACGA CGGCAACAAC ACCGACGCCA GCGGCCTGTC CGCGCTGGCG
TTCGACCCGT CCGCGGGCGC CAACGCGATG GTGCAGAGCC AGGCGGCGGT CAACGCCCGG
GCCACCATCA ACGGCCTGAG CGTCAGCTCG GCCAGCAACC TGCTGACCGA CGTGGTCGAC
GGGGTCACGA TCAAGCTCGG CAAGGTCAGC AGCACGCCGG TCGACCTGAG CGTGAGCAGC
AACACCGAAT CGGTCAAGAC CGCCGTGACG GCCTTCGCCG ACGCCTACAA CAACCTGTCG
AAGTACCTGG CCGAGCAGAC CAAGTACAAC GCCGCGGCCA AGTCCGGGGC GACGCTGCAG
GGCGATTCGG GCACCAACGC CCTGCGTTCG GCGATGCGCA ACATCATCGG CGGCACCAGC
GGCGTCACGG GTGCGTTCAA TCGCCTGGCC CAGGTCGGGC TCGACCCGCA GTCCGACGGC
ACGCTCAAGG TCGACAGCAC CAAGCTCACC AGCTCGCTGG GCAAGCTGGC CGACCTGAAG
GCGCTGTTCG CCAACAAGGA CGCCGGCAAC GAGGCCAACA ACGGCTTTGC CGTCAGCCTG
CAGAAGTGGG GTGACTCGCT GCTGAGCTTC GACGGCTCGC TGTCGACCCG CAGCAGCAGC
CTGCAGCGGC AGATCGATGC CAACGCGAAG AAGCAGGAAG ACTTCAACGA GCGCATGACC
GGGGTCGAGG CCCGCATCCG CGCCCAGTAC ACAGCGCTGG ACACGCAGAT GGCCAAGCTC
AACGGCCTGT CGACCTACAT GACCCAGCAG ATCACCAACA TGAACAAGAG TTCGAGCTGA
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| Protein sequence | MASISSAGIG SGLDVSSIVT QLMAVEKSPL QQMQTEASKI QSKLSAYGKV QSYVSALRDA
ALNLTKSDTW GSTTASSGDA SVFTATTASG ATAGNYSLTV QQMASAQTVA SAAWPASVST
VGSGVLRLEL GTWAAGQTGF TPKSGTSSVD VTVAASDTLA DVRDKINAAK SGVMASIVND
TSGSRLVLRS SETGAENAFR VTATDDDGNN TDASGLSALA FDPSAGANAM VQSQAAVNAR
ATINGLSVSS ASNLLTDVVD GVTIKLGKVS STPVDLSVSS NTESVKTAVT AFADAYNNLS
KYLAEQTKYN AAAKSGATLQ GDSGTNALRS AMRNIIGGTS GVTGAFNRLA QVGLDPQSDG
TLKVDSTKLT SSLGKLADLK ALFANKDAGN EANNGFAVSL QKWGDSLLSF DGSLSTRSSS
LQRQIDANAK KQEDFNERMT GVEARIRAQY TALDTQMAKL NGLSTYMTQQ ITNMNKSSS
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