| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1006 |
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| Symbol | |
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| ID | 6160168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1073626 |
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| End bp | 1074951 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663756 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001790042 |
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| Protein GI | 171057693 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCACC TCGTCGTCTC TCGCAACACC GAAGACCTGG CCTGGCTGCA TCAGCTGCCC
GCCCGATGCA GCGTGCGGGT CTACAACCAC GGCGCACCGC TCGATCCGGG CCGCCTGCCC
GAAGGCACGC AGGTCGTCCC GATGCAGGGC GGCGGCGCCA GCGCTGCCAG TTATCTGCAT
CACCTCAAGA CCGTCGGCGC CACCGGCGCG GACGATCACA CCGTCTTCAC GCCCGGCAAT
CCCTTCGTGC ACGCGCCGGC CTTCCTGGAA CTGCTGCGCA AGCCGCACCG CTGGGGCGAC
GTGCAGCCGC TGTCGATTCA CGGCGCCCCG ACCACCGCGC AGGGCCGCGG CATCCCGCCC
CATCGGCTGG CCGAGCGCGA CGCGCGCGAC TGGATCGGCG CGATGGCGGT ACGCCCGGAG
CGCTACAGCC TGTGCACCTG GGGCTCGGTG CATTTCATGG ACGAGCAGGC CTGGCGCCAC
GCCGAACACC ATCGCCGCCA GCACGACCTG CCGGACGGCA CCAACCTGGC GGCCCATTTC
TACGAACTCT GCGGCCTGAC GCGCCTGGCC GAAGACGCGG CCGACGCCGA CATCGGCCTG
ATGGCCTACG GTGGCGTGTT CGCGGTACGC GGCCGGGCGA TCGCCGCCCT GCTGGCCGAC
GCCGCGCCGC AGCTCGACCA GATCGCCACG CTGTGCCGGG CCGACCCGCA TTACCCGTGG
GTGCTCGAAC GCTGCTGGCT GCACCTGTTC GGCCTGCCCT ATGTGCGCCT CGAAGCACTC
GCGCGCCCGA CCGAGGCGAT CACGCCGATG GCCACCAGCC TGTCGCGCGT GGTCGCGTCG
ATCGATGCCC TGCTGGCGCG AGCCGAAGGC GAACCGGCGC CACGCCACGC GCGCCGGGTC
GAGGCGGCCG CGCCCGCTCG CCTGCAATCC TTGCGTGACC AGGCGCGCAG CGCGCTGAGC
GCGGGCGATG CCGACCGGGC GATGGCCTTG CTGCGACAGG CGGTGCAAGC CGCGCCACAG
GATGTCGAGA TCCTGGCCGA CACCGCGGCG CTGGCCTTCC AGCGCGGCGA CCTCGCCACG
GCGGTGCCGA TGGCACGCCG CGCGCTGCTG CTCGAGCCAC AGCACGCCGC CAGTCAGTTC
ACCCTCGCGA TGAGCCTGGC CGCGCTGGGC GAGCAGCATG AATCGCTGAG CCTGTTCGAC
GGGCTGATGC ACGCGGACTG CGCGCGCAGC TTCCGCACCG AACACCCCGA ACTGGCCGCC
ATCGCGGCGC GGCAGTCGCA CCACCTGCTC CAGCAGCAAC AGCAGCGCAG CACCGCGCTG
GCCTGA
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| Protein sequence | MLHLVVSRNT EDLAWLHQLP ARCSVRVYNH GAPLDPGRLP EGTQVVPMQG GGASAASYLH
HLKTVGATGA DDHTVFTPGN PFVHAPAFLE LLRKPHRWGD VQPLSIHGAP TTAQGRGIPP
HRLAERDARD WIGAMAVRPE RYSLCTWGSV HFMDEQAWRH AEHHRRQHDL PDGTNLAAHF
YELCGLTRLA EDAADADIGL MAYGGVFAVR GRAIAALLAD AAPQLDQIAT LCRADPHYPW
VLERCWLHLF GLPYVRLEAL ARPTEAITPM ATSLSRVVAS IDALLARAEG EPAPRHARRV
EAAAPARLQS LRDQARSALS AGDADRAMAL LRQAVQAAPQ DVEILADTAA LAFQRGDLAT
AVPMARRALL LEPQHAASQF TLAMSLAALG EQHESLSLFD GLMHADCARS FRTEHPELAA
IAARQSHHLL QQQQQRSTAL A
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