| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0955 |
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| Symbol | |
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| ID | 6160126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1018439 |
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| End bp | 1019521 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663706 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001789992 |
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| Protein GI | 171057643 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 105 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGC CGCGCATCAA GCCCTCGAGC TTCTTCCCTG AGGAGGAAGC GGTGGACGAC
CTGTTCCTGG CGCGCCAGCG CAAGGCCAAG CTCGAGGGCT ACGTGCAGAC GCTGGCGGCG
ATCGACGCGC TGGTGGACTT CACGGCGATG GCCGCGGCGG TCGATGCGGC GTGTCCGCGC
GCCGACCGCA AGAAGGGTGG CCGCCCGCCG TACCCGAGCG AGGTGCTGGT GCGCATGGTC
TTCCTGCAAG GGCTCTACAA CCTGTCGGAC GAGCAGTGCG AGCACCAGGT GCTCGACCGG
CTGAGCTTCC AGCGCTTCTG CCGGCTCGAC GGCGCCTTGA ACATCCCCGA CGCCCGCACG
CTGTGGAGCT TTCGGCAGCG CCTGGCCCAG GGCGGGCTGG GCGGACGGGC GATCTTCGAG
ACGCTGAGTC AGCAGTTGCA GCAGCACGGG TTCATCCCGC GCGGCGGGCA GATCGTCGAC
GCCAGCATCG TGGCCGCACC CATCACCCAG GCCAACACCG CCGAGCGCGA GGCGCTCAAC
AAGGGCGAGA CGCCCGAAGG CTGGAGCAAG AAGCGCATGG CGCACACCGA TGGCGACGCA
CGCTGGACGC AGAAGCACGG CAAGAGCTAC TACGGCTACA AGCTGCACGC CAACGCGGAT
GCGCGCTACA AGCTCATCCG CACCCTGAAG ATCACGGCGG CCAATGCCGA CGACGGCCAG
CAGCTCCCCC ACGTGCTGCA GTCGGCCAAC ACGCGCGATC GCCTGCTGGC CGACCGCGGC
TACGACAGCC AGGCCAACCG GCAGGTGCTG GCGCAGCAGG GCCTGGTCGA CGGCATCGCG
CGGCGGGCCA GGCCGGGGCA GACCGCCAAG ACCCGACTGA AGCAGCGCAA TCGCACGATC
AACCGGACCC GCTCGCGCGT CGAGCACGTC TTCGCCAGCC TGGCCCAGCA GGGCGGCAAG
TGCGTGCGGG CGATGACGCT GGCGCGCAAT GCGCTGGCCA TCACGCTGCA GTGCGCGGCC
TACAACGCGC GCAGGCTGGT GTGGCTGGTC AAGAGCACGG GTGCGTCTGC GAGGCCGGTG
TGA
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| Protein sequence | MITPRIKPSS FFPEEEAVDD LFLARQRKAK LEGYVQTLAA IDALVDFTAM AAAVDAACPR
ADRKKGGRPP YPSEVLVRMV FLQGLYNLSD EQCEHQVLDR LSFQRFCRLD GALNIPDART
LWSFRQRLAQ GGLGGRAIFE TLSQQLQQHG FIPRGGQIVD ASIVAAPITQ ANTAEREALN
KGETPEGWSK KRMAHTDGDA RWTQKHGKSY YGYKLHANAD ARYKLIRTLK ITAANADDGQ
QLPHVLQSAN TRDRLLADRG YDSQANRQVL AQQGLVDGIA RRARPGQTAK TRLKQRNRTI
NRTRSRVEHV FASLAQQGGK CVRAMTLARN ALAITLQCAA YNARRLVWLV KSTGASARPV
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