| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0923 |
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| Symbol | |
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| ID | 6159904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 987860 |
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| End bp | 988699 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663673 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001789960 |
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| Protein GI | 171057611 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 103 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCCG CCCACCGGGT GGTCTTCGTC GGTTTCTCGA GCTTCGAGCG CAGCACGCTC
GAGAGCTACT TCCGACTGGC CGGCGCCCAC GACCGGGGTT ACGAGGTCAT CCCCAACCTG
CACGACAGCG ACCTGGTGGT GGCCGACGCC GACCAGCCCG AGGCGGTGCT GGCGGTCGGC
CGCGCCGGCC GGGTGCGCGA CGCCATCTTC ATCGGCGGCG CGGCCGCACC GATGAGCGCG
GCGGCCCACC TGGCGCGCCC GATCGACGCC ATCCAGGTCA TGCGCGCGCT CAACGCGATG
GCACAGCGCC GCCCGGCGCG CCCGAGCGGG CGGGCCCGCC AGCAGGATGT CGACGCCCAC
CAGCGGGTCG GCGACTTCCA CAACAGCAGC GTCTACAGCA ACTCGGTGCT GATCGAGGGC
GAATCACGCC TCGACGAGGT GCTGGTCGTC AGCGCCAGCC CGGCCGAGCG GCGCGTGCTG
CACGACCTGC TGAGCCGCTA CGGCTACGGC GTGACGCTGG CGCGCAGCAC CGACGAGGCG
GTGCGCATGT GCGACGAGCA GTGTTACGGC TTCGTCTTCC TCGGCCTCGG CCAGGACGGC
ATCGACGGCT TCCAGGCCTG CCGGCGCATC AAGCGCCGGC CCACGCTGAC GGGGCTCGCA
CCGGTGATCG TGGCGCTGGC GCACCGGGCC GGCGCGATCG ACCGCATCCG CGCCACGTTT
GCAGGCTGCG ACGCCTACCT GACCACGCCG CTCGACGAGG CCGAGTTGCT GCGGGTGCTG
GCCCAGCACG ACCGCACCTT CGAGCGGGTG TTCGAGCCGA CCGCGCCGAT CCAGCACTGA
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| Protein sequence | MHSAHRVVFV GFSSFERSTL ESYFRLAGAH DRGYEVIPNL HDSDLVVADA DQPEAVLAVG
RAGRVRDAIF IGGAAAPMSA AAHLARPIDA IQVMRALNAM AQRRPARPSG RARQQDVDAH
QRVGDFHNSS VYSNSVLIEG ESRLDEVLVV SASPAERRVL HDLLSRYGYG VTLARSTDEA
VRMCDEQCYG FVFLGLGQDG IDGFQACRRI KRRPTLTGLA PVIVALAHRA GAIDRIRATF
AGCDAYLTTP LDEAELLRVL AQHDRTFERV FEPTAPIQH
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