Gene Lcho_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0899 
Symbol 
ID6162363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp964166 
End bp964819 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content72% 
IMG OID641663649 
Productphosphoribosyltransferase 
Protein accessionYP_001789936 
Protein GI171057587 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAT CGATCGAATG CGAGCACGTG CGCATCGGCC CGCGGGGGCT GCGGGGTGAG 
CTTGCGCTGG TCCCGCACGC GCTGGGCGGG GTGGTGTTCG CGCACGGCAG CGGCAGCAGC 
CGCCTGAGCC CGCGCAATCG GCTGGTGGCC GACCTGCTGC ATGCGCATCG GCTCGATACC 
CTGCTGTTCG ATCTGCTCAC CGAAGACGAG GCCGGCGACC GCCTCAAGGT GTTCGACGTC 
GGCCTGCTCG CCAGCCGCCT GGGCGGTGCG CTCGACTGGC TGCTGGAACG CGCCGAGTTC 
AGGCGCCTGC GGGTCGGCCT GTTCGGCGCC AGCACCGGTG CGGCGGCGGT GCTGCGCTTG 
GCGGCCGAGC ATCCGGGGCA GGTGGGTGCG GTGGTGTCGC GCGGCGGCCG TCCCGATCTG 
GCGGGCGGCT ACCTCGTCGG CGTGCAGGCG CCGACCCTGT TGATCGTCGG TGGCCTGGAT 
ACCGACGTGA TCGAGCTCAA TCGCCGCGCC ATGCGCCTGC TGCGCTGCAA CAAGCGGCTC 
GAGATCGTGC CCGGCGCTGG CCATCTGTTC GAGCAGCCGG GCACGCTCGA TGCCGTCGCG 
CAGCTCGCCG GCGGCTGGTT CGCCGCCCAT CTGTCGACCG GACGCTCACG ATGA
 
Protein sequence
MQPSIECEHV RIGPRGLRGE LALVPHALGG VVFAHGSGSS RLSPRNRLVA DLLHAHRLDT 
LLFDLLTEDE AGDRLKVFDV GLLASRLGGA LDWLLERAEF RRLRVGLFGA STGAAAVLRL 
AAEHPGQVGA VVSRGGRPDL AGGYLVGVQA PTLLIVGGLD TDVIELNRRA MRLLRCNKRL 
EIVPGAGHLF EQPGTLDAVA QLAGGWFAAH LSTGRSR