| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0863 |
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| Symbol | |
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| ID | 6160366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 927955 |
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| End bp | 929061 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663613 |
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| Product | P-type DNA transfer ATPase VirB11 |
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| Protein accession | YP_001789900 |
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| Protein GI | 171057551 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.349465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCC CGATGAACAC GGACCTCTTG GTCGATGGGT CGGACGCGCA GGCCTGGTCC
GGCGACGCCA CCTCGGTGGT GGAGTTCCTG CGGCCGCTGC GCGAGCACCT CGACCGACCC
GGCGTGCTGG AGGTCTGCCT GAACCAGCCC GGCGAACTGC AGATCGAGTC GGTGAGCGGC
TGGCAGGCGG TCGCCGCACC CGAGATGACC CAGGAGCGCT GCCTGTCGCT GGCCACCGCG
GTGGCCACCT TCTGCGACCA GCAGATCAAC CAGGAACGCC CGCTGCTGTC GGCCACGCTG
CCCAGCGGCG AGCGCATCCA GTTCGTGATC CCGCCGGCCG TGCCCCGCGG CACCGTGTCG
ATCACGGTGC GCAAACCCTC GCAGTTGGTC AAGCGGCTGG ACGACTTCGA GCACGAGGGC
CTGTTCGAGC GCACCGCCGA TGCGACGCGG CTGCAAGACC GCGATGGGCC GGCGTTCGAG
CCCTTCGAAC GCAATCTGGT GGCCCTGAAG GACGCCGGCC GCTACGCCGA CTTCCTGCGC
CTGGCGGTGC GCCAGCACCA GACCATCGTC GTCAGCGGTC GGACCGGCTC GGGCAAGACC
ACCTTCATGA AAGGCCTGGT CGAGGAGGTG CCCCGGCACG AGCGCCTGAT CACGATCCAG
GACACCGCCG AGCTGACGCT GCCGCACCAC CCCAACGTCG TGCACCTGTT CTACAGCAAG
GACGCGCAGG GCACGGCACG CGTGACGGCC AAGTCGCTGC TCGAAGCCTG CCTGCGCATG
AAGCCGGATC GGATCTTCCT GGCCGAGGTG CGCGGCGACG AGTGTTTCCA TTTCGTGCGG
CTGGCCGCCT CGGGCCACCC GGGCAGCATC ACCAGCCTGC ACGCGGGCAG CTGCGCCCTG
GCGCTGGAGC AGATGTCGCT GATGATCCGC GAGTGCGGCG CCGGCGGCGG GCTGCGCATG
GACGAGATCA AGTCGCTGCT GGCGATGGTG GTCGACGTGA TCGTGCAGTT CGATCGCGAC
GAGCACGGGC GCTTCATCTC GGAGATCGCG TACACGCCAC GCGCACAGCG GTCGGCACAG
GCGCACCGTG CAGGCAGCCC GTCATGA
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| Protein sequence | MRTPMNTDLL VDGSDAQAWS GDATSVVEFL RPLREHLDRP GVLEVCLNQP GELQIESVSG
WQAVAAPEMT QERCLSLATA VATFCDQQIN QERPLLSATL PSGERIQFVI PPAVPRGTVS
ITVRKPSQLV KRLDDFEHEG LFERTADATR LQDRDGPAFE PFERNLVALK DAGRYADFLR
LAVRQHQTIV VSGRTGSGKT TFMKGLVEEV PRHERLITIQ DTAELTLPHH PNVVHLFYSK
DAQGTARVTA KSLLEACLRM KPDRIFLAEV RGDECFHFVR LAASGHPGSI TSLHAGSCAL
ALEQMSLMIR ECGAGGGLRM DEIKSLLAMV VDVIVQFDRD EHGRFISEIA YTPRAQRSAQ
AHRAGSPS
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