| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0838 |
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| Symbol | |
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| ID | 6161494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 898088 |
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| End bp | 899191 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663588 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001789875 |
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| Protein GI | 171057526 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC ACACCGCACG CAAGCCACTC GGCAACGACA CCACCTTGGG CGTGGCGTGC
CTGGGCATCA CCCACCCGCA CACCTCCGGT CGGGTCCGGG CCCTGCAGCG CCTGCCCAAC
GCCCGCATGC TCGGCGCCGC CGACGACAGC CCGCTGCTGC AGCCCTTCTG CGACGCGCTC
GGCCTGACGC CGCGGACCAA GCAGGAGATC CTCGACGATC CCGACGTGCA CGTGGTCTAC
GTGCACTCCA AGAGCTACGC AATGGCCGAT CTGTCCATTG AAGCACTCGA AGCCGGCAAG
GCCGTGCTGT GCGAAAAGCC GGCCGGCCGC AATGCGGCCG ATGTACGCCG CATCGTCGAC
GCGGTCGAGC GCACCGGCGG CATCCTGCAG GTCGGCTACT GCTGGCGCTA CTCGCCGTCG
GTCGACAAGA TGCAGGAAGT GCTCAAGAGC GGGCGCCTGG GCAAGGTGCT GCAGGTGCGC
GCGCACGGCG GCTGCTCGCA CGACGAGGCC GACACCAATC ACATGAAGCA GCCCGGCGAC
ATCGGCGGGG CGATGTTCGT CATCTCCTGC CACCTGTTCG ACCGCGTGAT CCACCACTTC
GGCATGCCGC GTTCGGTCAA CGCCCGCATC ACCAAGTTCC CCGGCGCGAT GGGCCCGACC
TCGCGTGAGG ACGCGGCCGG CGCGGTGCTG AACTACGACG ACAAGATCGT CGTGGTCGAC
TTCTTCTCGT GGGACTCGCT GCCCTGGCTC GAAGCGTGGG ACATCACAGC CTACGGCACG
GCCGGGATGA TGAGTTCACG CCCGTCGCCG TCGAGCTACA AGATCTTCGA CAACGGCACG
GTCGACGGCC ACCGCGAAGG CTGGACCGAG TGGAGCGAGA CCGGCTTCCC GATCAACTGG
GCGTCGAAGA AGACGGTCTA TTCGCCCGAG CTGGCCGAGA TCGGCAACCC GGTCTTCTTC
GACCGTGAAC TGAGCCACTT CAGCAAGTCG GTGCGCGAAG GCGCGCCGGT GGTCATCCCC
GCGACGCAGG CACTCAACAT CAGCACGCTG ATCGAGGCCC TGTTCGCTTC TTCTGCACAA
GCAGGTTCCG AGGTTTTCCT GTGA
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| Protein sequence | MTTHTARKPL GNDTTLGVAC LGITHPHTSG RVRALQRLPN ARMLGAADDS PLLQPFCDAL
GLTPRTKQEI LDDPDVHVVY VHSKSYAMAD LSIEALEAGK AVLCEKPAGR NAADVRRIVD
AVERTGGILQ VGYCWRYSPS VDKMQEVLKS GRLGKVLQVR AHGGCSHDEA DTNHMKQPGD
IGGAMFVISC HLFDRVIHHF GMPRSVNARI TKFPGAMGPT SREDAAGAVL NYDDKIVVVD
FFSWDSLPWL EAWDITAYGT AGMMSSRPSP SSYKIFDNGT VDGHREGWTE WSETGFPINW
ASKKTVYSPE LAEIGNPVFF DRELSHFSKS VREGAPVVIP ATQALNISTL IEALFASSAQ
AGSEVFL
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