Gene Lcho_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0830 
Symbol 
ID6160641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp891479 
End bp891892 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID641663580 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001789867 
Protein GI171057518 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones102 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA TTGAAGGCAG TTGTCTCTGC GGCCAAGTTC AATACGCCTC GATGGCCGAG 
CCCCTGGTGG TTGCGCTGTG CAATTGCACG CATTGCCAGA AGCAGTCGGG CGGGGCTTTC
TCGGTCAATG TCGGGATACC CAAAGGTTCC TTGAAGTTCG AGACGGGTCA GACCCAGGTA
TTTGCCGATA GGGGGAGCAG TGGGCAGGCG GTCTATCGCC ATTTCTGTCC AAACTGCGGC
TCCCCCATTT TTTCGGACGT GGTCTCACGT CCTGGCCTGA TCTGGCTGAA AGCGGGAACA
TTGAAGGACA CATCGTGGGT CAAGCCCACG ATGTCCTTGT GGTGTGAATC CGCTCAATCG
TGGGTTCACC AACCGGACAT CCAGCAGTTC CGGCAAGGTC CGGCGTCCGT CTGA
 
Protein sequence
MAKIEGSCLC GQVQYASMAE PLVVALCNCT HCQKQSGGAF SVNVGIPKGS LKFETGQTQV 
FADRGSSGQA VYRHFCPNCG SPIFSDVVSR PGLIWLKAGT LKDTSWVKPT MSLWCESAQS
WVHQPDIQQF RQGPASV