| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0803 |
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| Symbol | |
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| ID | 6161119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 863769 |
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| End bp | 865514 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663553 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001789840 |
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| Protein GI | 171057491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACGA ATTCCAGCGC CCGACACGCG CCCGATCCCG ACACCCTCCT GGAGCGCCTC
GAGCACGCCC TGATCGCCGG TCGCCTCAAC CGGCGCGGCT TCATCAAGGC GGTCACCGCT
GCCGGTCTGG TCAGCACCGG CCTGCCGGCG CTGGCCGACG AACTCGACGC CATCCGCGCC
AACCAGAACG AGCGCGCCGC AGCGCTGCTG CCGGCCTACG ACTACGTCGT CATCGGCACC
GGCAGCGCCG GCTCCGCCCT GGTGGGCCGC CTGGCCGCCC AGCGCAACGC CAGCATCCTG
GTGATCGAGG CCGGCGACTG GGACACTGCG CCGTCGGTGC TAGACCCCGG TGTCTGGTTC
ACTAACCTCG GCTCCGAGCG CGATTGGCAG GACGTGGCGA TCCCGTCTGC CGGCACCAAC
AACCGTGCCA TTCCCGAGCA CATGGGCAAG GTCGTCGGCG GCGGCAGCAG CATCAACGCG
ACGATCTGGG CGCGCCCCTT CAAGAGCGAC CTCGAGCACT GGGCGCAGGT GAGCGGTGAC
GCCGCCTGGG GCTATGAACA TGGTCTGTCG ATCTATCGCC GCATGGAGAA CTGGCAGGGC
AAGCCGGACG CGCGCTATCG CGGCCAGGGC GGCCCGGTGT GGTGCCAGCC CGCACACAAC
CCGCATCCCG CAGCGACCGC GATGCTGGCC GCCTGCCGCA GCCTCGGCCT GCCGGTGCTC
GACGACCAGA ACGGCGCACG CGAGGAAGGC GCCGGCGGCT TCGCGCTGAT GAACCAGATC
ATCCGCGACG GCCGCCGCCA GAGCATCGCG CGGTCCTACC TGTATCCCGT GCTGGCGCAG
AAGAACGTCA CGCTGCTGGT CAAGACTCAT GTCGATCGGC TGACCTTCTC GGGCACCCGC
GCCACCGGCG TCGAGATCAG CCTCGCAGGG GCAACGCGCC GCATCGAGGC GAAGTCCGAG
GTGATCGTCT GCTCGGGCGG CATCAACACG CCCAAGCTGC TGATGCTCAG CGGCATCGGC
AACGAGGCCG ACCTGCGTGC CCACGGCATC AAGACCCTGG TGAACGCACC CGAGGTCGGC
CAGAACTTCC AGGATCACCT GCTGCACGGC GGCTGCATCT GGGAGCCGAA AGAACACATT
CCCCACCGCA ACAGCGCGGC CAACGCGGCG GGTTTCATCA AGAGCGATGC CCGCCTGGCC
ACGCCCGACC TCAACCTGGT ACAGATCGAA TTGCCCTATG CCAGCGATGT CGTCGGCAAG
CAGTATTCGC CGCCGAACAC CAGCTGGGCC CTGTGCGCCG GCCTGGTGGC GCCGAAGAGC
CGCGGCGCGA TCAAGCTGCG CTCGGCCAAC CCGACGGATC GGCCGATCGT CGACGCACGT
TTCCTGAGCC ATCCCGACGA CGTCAAGGCG CTGGCCCACG GCATCGAGGT CTGCCGCGAG
ATCGGCAACT CCGCCGCGAT GCGCGACTTC GTCAAGCGTG AAGTCGCCCC GGGCCAGAAG
CTCACCGGCC AGCCGATGGA AGACTTCGTG CGCAACGGCG CCACGACCTA TTTCCACCAG
GCCGGCACCT GCCGCATGGG CCGCGACGCC CAGGCCGTGG TCGACGCCCA GCTGCGCGTG
AACGGCGTGC AGAACCTGCG CATTGCCGAC AGCTCGATCA TGCCGCGCAT CCCCGGCGTG
GCCACGATGG CCACCTGCGC GCTCATCGGT GAGCGCATGG CTCAAATCCT GGGCAAGAGT
GCCTGA
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| Protein sequence | MYTNSSARHA PDPDTLLERL EHALIAGRLN RRGFIKAVTA AGLVSTGLPA LADELDAIRA
NQNERAAALL PAYDYVVIGT GSAGSALVGR LAAQRNASIL VIEAGDWDTA PSVLDPGVWF
TNLGSERDWQ DVAIPSAGTN NRAIPEHMGK VVGGGSSINA TIWARPFKSD LEHWAQVSGD
AAWGYEHGLS IYRRMENWQG KPDARYRGQG GPVWCQPAHN PHPAATAMLA ACRSLGLPVL
DDQNGAREEG AGGFALMNQI IRDGRRQSIA RSYLYPVLAQ KNVTLLVKTH VDRLTFSGTR
ATGVEISLAG ATRRIEAKSE VIVCSGGINT PKLLMLSGIG NEADLRAHGI KTLVNAPEVG
QNFQDHLLHG GCIWEPKEHI PHRNSAANAA GFIKSDARLA TPDLNLVQIE LPYASDVVGK
QYSPPNTSWA LCAGLVAPKS RGAIKLRSAN PTDRPIVDAR FLSHPDDVKA LAHGIEVCRE
IGNSAAMRDF VKREVAPGQK LTGQPMEDFV RNGATTYFHQ AGTCRMGRDA QAVVDAQLRV
NGVQNLRIAD SSIMPRIPGV ATMATCALIG ERMAQILGKS A
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