| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0802 |
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| Symbol | |
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| ID | 6161118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 862368 |
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| End bp | 863651 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663552 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001789839 |
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| Protein GI | 171057490 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC TCCCGACCCT CCCGTTCTAT TCAACGCAGG CCGAGCGTGT CGAGAGGGCA
CGTCGACGTT ATTTCGACGA AGGCCTGCCA CCGTCAGGCA TCGTCAGTGA TGCCGTCTTC
CAGTCGTGGG CGCGATGCCA GCGGCTGCAT GCCCAGCCGT CTGCCAAGGT GGTGTTCCAG
CCGGTGACGG CGAGTCGCAC CCATCTGGCC CTGCAGAGAA ACCGGGCCCT GCACGAGGCC
TGGCTGGAAG AACTGCCGCA ACTGCGGGCC ATTCTGGGGA CGACCTCTTG CGCCGCGATG
CTGACCGACG CCACCGGCGT GATGATCGGC GCCAGCTGCG CCGGCCGCGC GCACGAGCAG
CTGATGCCGG TGGCCACGCG CATCGGGGTC AACCTGTCCG AAGAGGCCGT CGGCACCACG
GCGCCGGGTG TCGTGGCGCG CACCGGTCAG CCGGTCTGCG TGCAGGGCGC TGAACACTTC
TTCGACGGTG TCCGGGCGAT GCACTGCGCG GCCGCGCCCA TCCGCGATGT GCAAGGGCGC
CTCGCGGGTG TGCTCGACAT CTCCAGCGAA TCGATTCCCT TCAGCTTCGA CGTCGCCTCG
GTGGTCGGCC TGTATGCCGG CGCGATCGAA AACCGCCTGC TGATCGCGCA GGCCGGCGAG
CACCTGATCC TGCGGCTGCA GGTGGCACCG TCGCTGCTGG ATTCGCCCAT GGCGGGGCTG
ATCGGCATCG ACACCGCGGG GCGACTGGTC TGGCGCAACG CGGTGGCGTC GCGCCTGCTG
GGCCTGCCCC CGGCGCAGCA GCACGACGTC TGCGCGTCGG TCGAGACCGC GCTCGGCGCG
CGCATCTCGG AGCTGGCCTC GCTGCCCCGA TCGGAAGCGG CGGCCCTCAA GCTGCCCAAC
GGGCTGATGG TCTGGGCCCG CTCCGAAATG AGGGCGCCCG ACGGTCATCG CCAGGTGGTT
CCGGCCTTCC CCATGGCCCC ACCGATTACG CCGGTTTCGG AGCCCGCCAT CGAGCCGGTC
CCGGCCGAAG CAGAAGCGGC GGCCGATCCG TCACCGTCCA AGGCCATGGC GCGGGCAGAA
GGCTTGACCA CGTTGCGCGA CTCGGACCGC GACCTCGTCG CCCGTGCGCT GGCGGATTGC
GGCGGCAATG TCTCCAAGGC GGCCAAGAAG CTGGGGGTTT CGCGCGGTCT GATCTATCGG
CGACTGCAAG GCCAGGCGCG CTCGTCGACC GCCATCGGCG CGCCGAGTGT TCTCAATCGG
AACAACTCGG ACGCCCTGGG ATAA
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| Protein sequence | MTQLPTLPFY STQAERVERA RRRYFDEGLP PSGIVSDAVF QSWARCQRLH AQPSAKVVFQ
PVTASRTHLA LQRNRALHEA WLEELPQLRA ILGTTSCAAM LTDATGVMIG ASCAGRAHEQ
LMPVATRIGV NLSEEAVGTT APGVVARTGQ PVCVQGAEHF FDGVRAMHCA AAPIRDVQGR
LAGVLDISSE SIPFSFDVAS VVGLYAGAIE NRLLIAQAGE HLILRLQVAP SLLDSPMAGL
IGIDTAGRLV WRNAVASRLL GLPPAQQHDV CASVETALGA RISELASLPR SEAAALKLPN
GLMVWARSEM RAPDGHRQVV PAFPMAPPIT PVSEPAIEPV PAEAEAAADP SPSKAMARAE
GLTTLRDSDR DLVARALADC GGNVSKAAKK LGVSRGLIYR RLQGQARSST AIGAPSVLNR
NNSDALG
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