| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0723 |
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| Symbol | |
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| ID | 6162960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 771530 |
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| End bp | 772525 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663475 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001789763 |
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| Protein GI | 171057414 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.065718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCT CACCCGAAAG AGACCGTCGC AGCCGCATCG CAACGCTGCA GACTGACATC
GCAGGCGTCA TCGAACGACA CACACGCGGC CTGGCGGACT GCGCGACGCC CATGGCCGAA
CTCGGCCTCT TCCGGCGCGA GGCGCCGGCC CGTCCCGCGG TCTGCATGGT GCAGCCCAGC
ATCGTGATGG TGGCCCAGGG CACCAAGCGC CTGCTGGTCG GCGGTGAGGG CTACGTCTAC
GACGCCGAGC GGTTCCTGGT CACATCGCTG GACCTGCCGG CCAACTCGGA GGTCATCGCT
GCATCGGTGC CCAAGCCCTG CGTCGGCCTG GTGCTCAGGC TGGACGTCCG ACTGCTCGCC
GAACTGATCG CGCGGGAACC CGAGGCACCG CCGCGCGAAC GTTCGCTGCA GGGCAGCGTC
GGTGTCGGCG GGGTCACGGC GGCGATGCTG GAGCCGATCG CGCGCCTGCT GGCGCTGCTC
GACGAACCGG CGGCCATCCC CGTGCTCGCC CCCTTGATCC AGCGGGAGAT CCACTACCGG
CTGCTGGCCA CCGACCAGGC GCCCCGTTTG CGACAGATCG TGTCCGTCGG CAGCCAGAGC
CACCGCGTCG CGCGGGCGAT CGACTGGCTG AAGATGCACT ACGTCGAGCC CCTTCGGGTC
GAGGACCTGG CAGCCCGGGC CCAGATGAGC GTGTCGGGCC TGCACCACCA CTTCAAGCAG
CTCACCGGCT TGAGTCCGCT GCAGTTCCAG AAGTGGTTGC GGCTGAACGA AGCGCGACGG
CTGATGCTGA GCGATGGCGC GGAAGCCGCG ACCGCTGCTT TCAGCGTCGG CTACGAGAGC
CCGTCGCAGT TCAGCCGTGA ATACGCCAGG CTGTTCGGCG CGCCACCACG GCGGGACGTC
GAGGCGCTGC GGCCAGGCCG TGGCGCGCAG ATGTCGGGAC CGGCGGCGCC AGGACGCCAT
CGCCGATCGA TGGCCGCAGC CGGTGCAGCA GGGTAG
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| Protein sequence | MQSSPERDRR SRIATLQTDI AGVIERHTRG LADCATPMAE LGLFRREAPA RPAVCMVQPS
IVMVAQGTKR LLVGGEGYVY DAERFLVTSL DLPANSEVIA ASVPKPCVGL VLRLDVRLLA
ELIAREPEAP PRERSLQGSV GVGGVTAAML EPIARLLALL DEPAAIPVLA PLIQREIHYR
LLATDQAPRL RQIVSVGSQS HRVARAIDWL KMHYVEPLRV EDLAARAQMS VSGLHHHFKQ
LTGLSPLQFQ KWLRLNEARR LMLSDGAEAA TAAFSVGYES PSQFSREYAR LFGAPPRRDV
EALRPGRGAQ MSGPAAPGRH RRSMAAAGAA G
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