Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0717 |
Symbol | |
ID | 6163093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 765827 |
End bp | 766750 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663469 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001789757 |
Protein GI | 171057408 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.336385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGA TCAAGCCAAC CTTCCTCGTC ACGGGCAGCG ATCTCGCCGC CGCGGCGCTG GCGCTGCTGC ACGACCACGA GGTCGTCTAT GCCGGCAAGA CGCCGACCGA GGATCACATC GTCGCGCTGT GCCGGCAGCA CGACCCGGTG GCGATCATCG TGCGCTACAG CAAGGTGGGC GCCGCCGCGA TGGACGCCGC GCCAAGCCTG AAGGTGATCT CCAAGCACGG CAGCGGCACC GACACGATCG ACAAGAGCGC CGCCGCTGCG CGTGGCATCC AGGTTGTCGC GGCGGCCGGC GCCAACGCGG CGGCCGTCGC CGAGCATGCG CTGGCGCTGT TGATGGCCTG CGCCAAGTCG GTGGTCACGC TCGATGCCCG CATGCGTCAG GGCCACTGGG ACAAGGCAAC CCACAAGAGC GTCGAACTCG AAGGCCGCAC GGTCGGTTTG ATCGGACTCG GTGCGATCGG CCAACGCTTC GCGCGCATGG CCGACGCGAT GGGCATGCGC GTGCTCGGCT TCGACCCTTT TGCCAAGGAG CTGCCGGACT ACATCGAACG CGCCGAGCTG GCGACGATCT GGCGCGAGTC GGACGTGATC TCGCTGCACT GCCCGCTGAC GCCCGAAAAC GCGAAGCTGC TGAATGCGCA GACGCTGGGC GCCTGCAAGA AGGGCGTGAT CGTCGTCAAC ACCGCACGTG GCGGCCTGAT CGACGAGCCA GCGCTGCTGG CGGCCATCCG CAGCGGGCAG GTGGGCAGCG CGGGGTTGGA CAGCTTCGCC GCCGAACCGA TGACGGCGCC GCATCCCTTC CACGGCGAAG CGCGCATCAC GCTGAGTCCG CACATCGGCG GCGTCACCGC CGATGCCTAC GTCAAGATGG GCGTGGCCGC GGCGAAGAAC GCACTGGCCG TGCTGCAGGG CTGA
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Protein sequence | MSAIKPTFLV TGSDLAAAAL ALLHDHEVVY AGKTPTEDHI VALCRQHDPV AIIVRYSKVG AAAMDAAPSL KVISKHGSGT DTIDKSAAAA RGIQVVAAAG ANAAAVAEHA LALLMACAKS VVTLDARMRQ GHWDKATHKS VELEGRTVGL IGLGAIGQRF ARMADAMGMR VLGFDPFAKE LPDYIERAEL ATIWRESDVI SLHCPLTPEN AKLLNAQTLG ACKKGVIVVN TARGGLIDEP ALLAAIRSGQ VGSAGLDSFA AEPMTAPHPF HGEARITLSP HIGGVTADAY VKMGVAAAKN ALAVLQG
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