Gene Lcho_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0706 
Symbol 
ID6163754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp754875 
End bp755789 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content67% 
IMG OID641663458 
Productprotein serine/threonine phosphatase 
Protein accessionYP_001789746 
Protein GI171057397 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.546937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTT CGGTTTACCA GATCAGCCGT CGCGGCGGCC GTGAGAAAAA TGAAGACCGC 
ATGGGCTATT GCTACACCCG TGACTCCGGG CTGTTTGCAC TGGCCGACGG CATGGGCGGC
CATCCCGAGG GCGAGGTCGC CTCGCAGCTG TCGCTGCAGA CACTGGGCGT GATGTTCCAG
CGCGAGGCCA AGCCGATCCT GAAGGATCCG CGGCGCTTTC TCAACGAAGG CATCATCGCC
GGCCACCACC AGCTGATCCG CTACGCCACC GAGCGCGCCC TGCTCGACAC CCCGCGCACC
ACCATCATCG CCTGCGTGCT GCAAGGCCGC GAAGCCTACT GGGCGCACTG CGGCGACTCG
CGGCTGTACC TGGTGCGTGG CGGCAAGCTG CTGGCGCGCA CGCGTGACCA CTCCTATTCC
GAACTGCAGG AAACGCTCGC CGGCGTGGTG CCGATCGGCG AACGCGTCAA CCGCAACGTG
CTGTTCACCT GCCTGGGCAG CCCGGGCAAG CCGGTGATCG ACACCGTCGG GCCACTCACG
CTGCAGCCCG GCGACAAGCT GCTGCTGTGC TCCGACGGCC TGTGGGGCAG CGTCGACGAC
GACACCATCA CCGAGCATCT GGCCACCAGT CCGATCACCG ACGCGGTGCC CGATCTGGTC
GAGCTGGCGC TGCGCATCGC CGGCGAGAAG AGCGACAACG TCACCGTCAT CGCGGTCGAA
TGGGAGTCGG CCGAAGACGA GGAACCCGGC ACCGGCATCG AGACCGACGA CCTCGGCAGC
GACGTGTTCG CCTCGACCAT CCAGGCCGGC GTCGGTGCCG GCAACCCCGA CGACCTGCTC
GACGACGCCG AGATCGAACG CTCGATCCGC GAGATCAACG AGGCCATCAA GCGCAGCGCC
CAGAAACGCG GCTGA
 
Protein sequence
MRFSVYQISR RGGREKNEDR MGYCYTRDSG LFALADGMGG HPEGEVASQL SLQTLGVMFQ 
REAKPILKDP RRFLNEGIIA GHHQLIRYAT ERALLDTPRT TIIACVLQGR EAYWAHCGDS
RLYLVRGGKL LARTRDHSYS ELQETLAGVV PIGERVNRNV LFTCLGSPGK PVIDTVGPLT
LQPGDKLLLC SDGLWGSVDD DTITEHLATS PITDAVPDLV ELALRIAGEK SDNVTVIAVE
WESAEDEEPG TGIETDDLGS DVFASTIQAG VGAGNPDDLL DDAEIERSIR EINEAIKRSA
QKRG