Gene Lcho_0695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0695 
SymbolradC 
ID6160822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp745438 
End bp746106 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID641663447 
ProductDNA repair protein RadC 
Protein accessionYP_001789735 
Protein GI171057386 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.63774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACT TGCCAGCGGC CATGCGCCCG CGCGAAAAAC TCCTGGCCCT GGGGCCGGCA 
GCCCTGGCCG ACGCCGAACT GCTGGCGCTG CTGTTGCGCA CCGGCCTCAA GGGCACGGGG 
GTGTTGCAGC TCGCCGGCCA GTTGCTGGCG CAGTTCGGCG GCATCGGCGG GCTGCTGCAG 
GCCGACCCGG CCGGCCTGAA GACCGTCAAG GGACTGGGCC CGGCCAAACG CTCCGAACTG 
CAGGCCGTGC TCGAACTGGC GCGCCGCGCG ATCGTCTCGC AGCTGGCGCA GCGGCCGGTC 
TTCGACAGCC CGCAGGCGGT GCGCGACTAC CTGCGCCTGC AGCTCGGCCG GCTCGATCAC 
GAGGTGTTCG CGGTGCTGTT CCTGGACGCC CAGCATCGCC TGATCGCCTA CGAGCCGCTG 
TTTCGCGGCA CGCTGACGCA GACCAGCGTC TACCCGCGCG AGGTGCTCAA GCGCGCGCTG 
GCGCTCAACG CGGCGGCGCT GATCCTGGCG CACAACCACC CGTCGGGCGT GGCCGAGCCG 
TCGCGCGCCG ACGAGTTCCT GACCCAGAGC CTGAAGACCG CGCTGGCGCT GATCGACGTG 
CGGGTGCTCG ACCATTTCGT GGTCGGCCGC GAGAGCGTGG TGTCGTTTGC CGAGCGGGGG 
CTGCTGTGA
 
Protein sequence
MKDLPAAMRP REKLLALGPA ALADAELLAL LLRTGLKGTG VLQLAGQLLA QFGGIGGLLQ 
ADPAGLKTVK GLGPAKRSEL QAVLELARRA IVSQLAQRPV FDSPQAVRDY LRLQLGRLDH 
EVFAVLFLDA QHRLIAYEPL FRGTLTQTSV YPREVLKRAL ALNAAALILA HNHPSGVAEP 
SRADEFLTQS LKTALALIDV RVLDHFVVGR ESVVSFAERG LL