| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0670 |
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| Symbol | |
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| ID | 6163862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 724316 |
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| End bp | 725878 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663421 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001789710 |
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| Protein GI | 171057361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TGCGCGCCGC CTCACTTGTT TCTGCCTGGA CGCTGGCATC GCGTATCACC
GGGCTGGTGC GCGAGCAGCT GATCGCCGCG GCCTTCGGCG CCAGCAGCGC GACCGACGCC
TACCAGGTCG CCTTCCGCAT CCCCAACCTG CTGCGCCGGC TGTTTGCCGA GGGTGCGTTC
TCGCAGGCTT TCGTGCCGAT CCTGGCCGCC AGCCGCGCCA GGCAGGGCGA CGAAGCCACC
TCGCGCCTGA TCGACGCCGT CGCCACCGTG CTGCTGTGGG TGCTGCTGCT GGTCTGCCTG
CTGGGCGTGC TGGGCGCGCC GGTGCTGGTG TGGCTGATGG CGTCGGGCCT GCCCGAGCAG
GGCCAGGCCG ACGCCGTCAC GATGACGCGC TGGATGTTCC CGTACATCGG TTGCATGTCG
CTGGTGGCGC TGTCGGCCGG CATCCTCAAC ACCTGGAGGC GTTTTGCCGT GCCGGCCGCC
ACGCCGGTGC TGCTGAACCT GAGCGTGATT GGCGCGGCCT GGTGGCTGGC GCCGGTGTTC
GAGCGCCAGG GCTGGCCGCC GATCCGATCG CTGGCGGTGG GCGTGATGAT CGGCGGCCTG
CTGCAGCTGG CGCTGCAGGT GCCGGCGCTG CTGCGCATCG GCGTGTTCCC GCGGGTGGGC
CTGACGCCTG CGCGTTTTCG TGCGGCCTGG GCGCACGATG GCGTGCACCA CATCCTGCGG
CAGATGGCGC CGGCGCTGCT GGGCGTGTCG GTGGCGCAGC TGTCGCTGCT GATCAATACG
CAGATCGCCT CGCATCTGCA ACCCGGCTCG GTCTCGTGGC TGACCTATGC CGATCGCCTG
ATGGAGTTCC CGACCGCGCT GCTCGGTGTC GCGCTCGGCG TGGTGCTGCT GCCGCAGCTG
TCGGCGGCGC AGGCCTCGGG CGAGTCCGAA CGCTATTCGG CGCTGCTCGA CTGGGGCCTG
CGCCTGGTGG TGCTGCTGGC GCTGCCGTGC GCGGTGGCCT TGCTGGTGTT TCCGCAGCCG
CTGGTGGCGG TGCTGTATCA CTACGGCCAG TTCAAGCCGA CCGACGTGAA CCAGACCGTG
ATCGCGCTGA TGGGCTACGG CGCCGGGTTG CTCGGGCTGG TGGCGATCAA GGTGCTGGCG
CCGGGTTTCT ACGCGCGCCA GGACATCCGC ACGCCGGTGC GCATCGCCAT CACCGTGCTG
GTGCTGACGC AGCTGATGAA CCTGGCGCTG GTGCCGCTGC TCGGGCATGC CGGGCTGGCC
CTGTCGATCG GGCTGGCCGC GCTGGTCAAT GCCACCTGGC TGCTGATCGG GCTGCGCCGG
CGCGGCAGCT ATCGGCCGTC GGCCGAGTGG CGGGGTTTCC TGCTGCGCAT CGGCCTGGCC
TGCGGCGTGA TGGGTGTCGG CCTGGCCTGG GCCGCCCGCG CCATCGACTG GATCGGGCTC
GGTGCATCGC CGGGTCTGCG GGTGCTGTGG CTGGCCGGCG TGCTGGTGGC CGCGGCGCTG
GCCTACTTCG GATCGCTGCT GCTGGCGGGG GTTCAGTTGC GCCAGTTCGC GCGTCGACAT
TGA
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| Protein sequence | MNLLRAASLV SAWTLASRIT GLVREQLIAA AFGASSATDA YQVAFRIPNL LRRLFAEGAF
SQAFVPILAA SRARQGDEAT SRLIDAVATV LLWVLLLVCL LGVLGAPVLV WLMASGLPEQ
GQADAVTMTR WMFPYIGCMS LVALSAGILN TWRRFAVPAA TPVLLNLSVI GAAWWLAPVF
ERQGWPPIRS LAVGVMIGGL LQLALQVPAL LRIGVFPRVG LTPARFRAAW AHDGVHHILR
QMAPALLGVS VAQLSLLINT QIASHLQPGS VSWLTYADRL MEFPTALLGV ALGVVLLPQL
SAAQASGESE RYSALLDWGL RLVVLLALPC AVALLVFPQP LVAVLYHYGQ FKPTDVNQTV
IALMGYGAGL LGLVAIKVLA PGFYARQDIR TPVRIAITVL VLTQLMNLAL VPLLGHAGLA
LSIGLAALVN ATWLLIGLRR RGSYRPSAEW RGFLLRIGLA CGVMGVGLAW AARAIDWIGL
GASPGLRVLW LAGVLVAAAL AYFGSLLLAG VQLRQFARRH
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