| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0629 |
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| Symbol | |
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| ID | 6159972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 676061 |
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| End bp | 677287 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663379 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001789669 |
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| Protein GI | 171057320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGCGC TCTTCATCCA CCAGAATTTC CCGGGGCAGT TTCGCCATCT GGTCGATCAT
CTGGCACGCC AGGGCGGCCA CCAGCTGGTC TGCATCGGCC AACGTGACGG CGCGCCGCTG
CCGAACACCA CCTACGTGCG CTACCGGCCC AAGCGCGCGC CCGGCCCGGC GACCCATCCC
TATCTGATCG GCATGGAGTC CGCGGTGCTC GCCGGCCAGG CGGTGCTCGA AACCCTGCTG
CAGCTGCGCC AGCAAGGCTT CGTGCCCGAC GTCGTGATCG CCCACCCCAG CTGGGGCGAG
ACGCTCTACG TGCGCGAGGC CTATCCCGCC GCCCGGCTGA TCCATTTCTG CGAGTTCTAC
TACCACACCG AGGGTGCGGA CGTCGGCTTC GACCCGGCTT TCCCGCTCAC GCTCGATCAG
CGCGCCCGGC TGCGCACCCG CAACGCCTTG CACCTGCTCA ACCTCGAGAA CTGCGACGTT
GCCGTCTCGC CCACCCACTG GCAGAAATCG GTGCACCCGC TGGCCTACCA GCCGCGCATC
GAGGTGATCC ACGAAGGTGT CGACACCCGC GCGGCACGCC CCGACCCGCT CGCCACCTTC
GAGCTGCCCG ACGGCCGCGT GCTGCGCGCC GGTGACCCGG TGGTGACTTA TGTGGCGCGC
AACCTCGAGC CCTATCGCGG CTTCCCGCAG TTCATGCAGG CGCTGGCGCA ACTGCAGGCC
CAGCGCCCCG ACGTGCAGGC GCTGATCATC GGTGCCGACG GCGTCAGCTA CGGCAACCCG
CCCGCCGACG CGCCCAACTG GCGCGAGAAG CTGCTGCGCG AACTGCCGCT CGACGCCAGC
CGCACGCACT TTCTCGGCAC CTTGCCGCAC GCGCGTTACC TGCAGGCGCT GCAGGTGTCG
GCCGCGCATG TCTACCTCAC GGTGCCGTTC GTGCTGTCGT GGTCGCTGCT CGAAGCGCTG
GCCAGCGGCT GCCTGGTGAT CGCTTCCGAC ACCGCGCCGG TGCGCGAGGT CATCCAGCAC
GGCCGCCAGG GCCTGCTGGT CGATTTCTTC GACGTCGCTG CGCTGACGCA GCACCTGCTC
GCAGCGGTCG ACCAGTCCGC CGCGTTCACC GCCCTGCGCC AAGCCGGGCC GGCCCACGTG
GCTGCGCGAT ACAGCGTCGA CGCCGGCTGT GCCCAGTGGC TGGCGCTGCT GCAGCGTGTC
ACGCAGGATT TCAGGTTCCA GCGCTGA
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| Protein sequence | MKALFIHQNF PGQFRHLVDH LARQGGHQLV CIGQRDGAPL PNTTYVRYRP KRAPGPATHP
YLIGMESAVL AGQAVLETLL QLRQQGFVPD VVIAHPSWGE TLYVREAYPA ARLIHFCEFY
YHTEGADVGF DPAFPLTLDQ RARLRTRNAL HLLNLENCDV AVSPTHWQKS VHPLAYQPRI
EVIHEGVDTR AARPDPLATF ELPDGRVLRA GDPVVTYVAR NLEPYRGFPQ FMQALAQLQA
QRPDVQALII GADGVSYGNP PADAPNWREK LLRELPLDAS RTHFLGTLPH ARYLQALQVS
AAHVYLTVPF VLSWSLLEAL ASGCLVIASD TAPVREVIQH GRQGLLVDFF DVAALTQHLL
AAVDQSAAFT ALRQAGPAHV AARYSVDAGC AQWLALLQRV TQDFRFQR
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