Gene Lcho_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0577 
Symbol 
ID6160146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp626558 
End bp626869 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID641663326 
Productglutaredoxin-like protein 
Protein accessionYP_001789617 
Protein GI171057268 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.220445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTG CTCAAACCCG CATCGACGAA CTCGTCAAAT CGCACCCCGT GGTGCTGTTC 
ATGAAGGGCA CGGCCCAGTT CCCGATGTGC GGCTTCTCCG GCCGCGCGAT CCAGATCCTG
AAGGCCTGCG GCGTCAGCGA CCTGACCACC GTCAACGTGC TCGAGGACGA CGGCATCCGC
CAGGGCATCA AGGAATACGC CAACTGGCCG ACCATCCCGC AGCTCTACGT CAAGGGCGAG
TTCGTCGGCG GCTCGGACAT CATGATGGAG ATGTACCAGG CCGGCGAACT GCAAGAGCTG
CTGAAGGCCT GA
 
Protein sequence
MTTAQTRIDE LVKSHPVVLF MKGTAQFPMC GFSGRAIQIL KACGVSDLTT VNVLEDDGIR 
QGIKEYANWP TIPQLYVKGE FVGGSDIMME MYQAGELQEL LKA