Gene Lcho_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0452 
Symbol 
ID6164104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp493864 
End bp494382 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content71% 
IMG OID641663201 
Producthypothetical protein 
Protein accessionYP_001789492 
Protein GI171057143 
COG category[S] Function unknown 
COG ID[COG4702] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCC TCACCAGCGA TCAGATGAAG ACGCTGCAGC ACGACCTGGC GCGCATCGCC 
GACCAGGAGA GCCGCTTGCA CCTGCCGCAC TTCAACCAGG CCATCGCCTG GGACATCGGC 
CTGGCGCTCA AGCGCCTGGC CGAAGCCCGC GGCCACGCCG TCACGATCGA GATCCGGCTG 
GCGCACGAGC TGGTGTTCTT CCACGCCATG CCCGGCACCA CGCCGGCCAA CGCCGACTGG 
GCCCGGCGCA AGCGCAACAC CGTCGAGCTG CTGCATCGCA GCTCGTACGC GGTGGGCCGC 
TCGCTGGCGC TCGAAGGCAG CTCGCTCGAA ACCATGATGG GCCTGCCCGC CCGCGACTAC 
GCCAGCCACG GCGGCAGTTT CCCGGTCCGG CTGGCGGGCG GCGCCTGCGT CGGCACGGTC 
ACGGTCTCGG GCCTGCCGCA GCGTGAAGAC CACGCGCTGG TGGTCGAGGT GCTGGCGCTG 
CAGTGCGACC TCGAGCCGAC CGCGATCGCG CTCGATTGA
 
Protein sequence
MSPLTSDQMK TLQHDLARIA DQESRLHLPH FNQAIAWDIG LALKRLAEAR GHAVTIEIRL 
AHELVFFHAM PGTTPANADW ARRKRNTVEL LHRSSYAVGR SLALEGSSLE TMMGLPARDY 
ASHGGSFPVR LAGGACVGTV TVSGLPQRED HALVVEVLAL QCDLEPTAIA LD