| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0429 |
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| Symbol | |
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| ID | 6163871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 470410 |
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| End bp | 471552 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641663178 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001789469 |
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| Protein GI | 171057120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTGGA CCCACTCTGA CGATTCCCGC ACGAGCGACC CCGATGCGCC GGTCGTGATC
CGCTTCCCGG CCCTCGGCGA TGCCGTCCTG CTGACCCCCT TGCTGGCCGC GCTGGCCCGG
CGCTACGGCC GGCCGGTGCA CCTGCTGACG TCCGGCGCCT GGACGCCCAT CGTGCTGGGC
CACGACCCGG CGGTGGGCGA GATCCGCAGC GTGAGCAGCC GGCGTGCGCC GTACTGGCTG
ACGCCGAGCC AGTGGACGGC GGTGCGCTGG CTGCGGGCCC ACCGCGGCCC GATCTACCTG
TGCGAGCGCG ACGAACACGC CGCCCGCCTG CTGGCGCGCG CCGGCCTGCC GGCCGGGCGC
ATCGTGCGGG CCTGGGATCA CCACCCGGCA CAGCCGATCC ACTGGGCCGA CTGGTGGCTG
CAGGTGGCCC GCCTCGACGC CCCGGATTGC CCGGGGCCGC ACGACGACCG GCCTGACATC
GCGCCGCTGC CCCGGCTGCA TGCGCCGGCC GAATGGACCG TGCAGACCCG CGAGTGGCTG
GCGCAGCGCG GCCTGGCCGG CCGCGCGCTG GTGCTGATCC AGCCGGGCAA CAAGAAGACC
CACAAACGCG GCCGCATCGC CACCGCGGCG CACGACAAGC ACTGGCCGAG CGGTCACTGG
GCCGAGGTGA TCCGCGGCGT GCTGGCCGGC CTGCCGGGCG CAGCGGTGCT GGTCTGCGGC
AGCCCGCGCG AGGCCGGGCT GGTGCAGGAG ATCGTCGATG CCACGGGCGC GGGCGCCGAT
CAGGTGCTCA ACATCGCCCG CGAGGCGCCG CTGCCGCGCC TGGTCGGGCT GGCGGCGCTG
GCGCACAGCA TGATCTCGGT CGACACCGGG CCGGCCCATG TAGCCGGCGC GATGGACTGC
CCGCTGGTGG TGCTGTACGG CCGCTTCGGC TGGCTGCGCT GGGTGCCGCG CACGGCCGGT
GCCAGCGTCG TGCCGCTGGG CCCGCGCGAG CCGGACGAAC GCGCCCGCCT GCTCGACCTC
ACGCCCGCCG CCGTGCTCGC GGCCTGGCAC ACGCTGCGGC CGCGCGCAAC GGCGGCGCCG
GTGCGGTCCG GGCACCCGCT GCCGCAGGCG GCGGACGCTG CTGCGCTCAG AACGCCCGCT
TGA
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| Protein sequence | MMWTHSDDSR TSDPDAPVVI RFPALGDAVL LTPLLAALAR RYGRPVHLLT SGAWTPIVLG
HDPAVGEIRS VSSRRAPYWL TPSQWTAVRW LRAHRGPIYL CERDEHAARL LARAGLPAGR
IVRAWDHHPA QPIHWADWWL QVARLDAPDC PGPHDDRPDI APLPRLHAPA EWTVQTREWL
AQRGLAGRAL VLIQPGNKKT HKRGRIATAA HDKHWPSGHW AEVIRGVLAG LPGAAVLVCG
SPREAGLVQE IVDATGAGAD QVLNIAREAP LPRLVGLAAL AHSMISVDTG PAHVAGAMDC
PLVVLYGRFG WLRWVPRTAG ASVVPLGPRE PDERARLLDL TPAAVLAAWH TLRPRATAAP
VRSGHPLPQA ADAAALRTPA
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