Gene Lcho_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0426 
Symbol 
ID6163837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp468346 
End bp468666 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content64% 
IMG OID641663175 
ProductNAD(P) transhydrogenase, subunit alpha part 2 
Protein accessionYP_001789466 
Protein GI171057117 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG TCTCCCCCAC CATCATCAAC CTGATCATCT TCGTGCTGGC CATCTACGTG 
GGTTACCACG TGGTCTGGAC CGTCACGCCC GCGCTGCACA CGCCGCTGAT GGCGGTGACC
AACGCGATCT CGGCGATCGT GATCGTCGGC GCCATGCTGG CGGCCGCGCT GACCGAAACC
ACCCTCGGCA AGACCATGGG CGTGCTGGCG GTCGCGCTGG CCGCGGTCAA CGTGTTCGGC
GGATTCCTCG TCACGCGCCG CATGCTGGAA ATGTTCAAGA AGAAAGACCG TCCGGCCAAG
GCCGTCGAGG GGAAACACTA A
 
Protein sequence
MDIVSPTIIN LIIFVLAIYV GYHVVWTVTP ALHTPLMAVT NAISAIVIVG AMLAAALTET 
TLGKTMGVLA VALAAVNVFG GFLVTRRMLE MFKKKDRPAK AVEGKH