| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0399 |
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| Symbol | |
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| ID | 6161688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 438197 |
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| End bp | 438961 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663148 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001789439 |
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| Protein GI | 171057090 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.255142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCG ATCACGCCAC GCCCGCCCGC CGCGCATCGA AGCCGAACCG GCGATCGCAC
CGTGTCCGCC GAGCGTTGGC GCTGCTGGTG CTTGCGGGCA GCCAGGCGGC GATCGCGGCA
CCGGCTGCGG CCACGCTGGC GGCGCCCGGC GCCGGCAACG GGGCGGCGGG CTCGGCCTCG
GCGCTGATCG CCGCGGTGAT CGAACACCGC GCCGGCCACT TTGACAAGGC CGCCCGTGCG
TTTGACGAAC TCGCCCGCGC CGGCCTGCCG GCGGCGATGC ACAACCTGGC GGTGATGCAC
CTGGGCGGCG AGGTCACGCC CGCCAGCGTC GAGACCGCCC GCGGCCTGCT CGAACAGGCC
GCCGCAGCCG GCTTCATCAG CTCGCAACTG GCACTCGCCG AACTGCACGA AAGCGGCCGG
CTCGGACGAC GCGACCCGGC CGGCGCCCTG CCCTGGCTGC GCCGCGCGGC CGACGCGGGC
CATGTCGATT CGCAGGTGGC GGTCGGCACC GCCTACTACC TGGGCCGCGG CATCGCGCGC
GACGAAAGCC AGGCGCTCGA CTGGTATCGC AAGGCCGCCC GCGCCGGCGA CGTCGGCGCG
CAATACCTGG TGGCGTCGAT GTACGAAACG GGGCTGGGCG TGGCGGTCGA CCTGCGGCTG
GCGCGCTACT GGTACGACGT CGCCGCCCAC CTGGGCGACC CCGCCGCACG CGGCAAGCGC
GATCAGCTGG ACCGTCAGCT CAGCACGGCG ACCGGGGCGC CGTGA
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| Protein sequence | MQPDHATPAR RASKPNRRSH RVRRALALLV LAGSQAAIAA PAAATLAAPG AGNGAAGSAS
ALIAAVIEHR AGHFDKAARA FDELARAGLP AAMHNLAVMH LGGEVTPASV ETARGLLEQA
AAAGFISSQL ALAELHESGR LGRRDPAGAL PWLRRAADAG HVDSQVAVGT AYYLGRGIAR
DESQALDWYR KAARAGDVGA QYLVASMYET GLGVAVDLRL ARYWYDVAAH LGDPAARGKR
DQLDRQLSTA TGAP
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