| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0383 |
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| Symbol | |
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| ID | 6163879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 421096 |
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| End bp | 422304 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641663132 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_001789423 |
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| Protein GI | 171057074 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0181778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCT GGGAAGACAC CCCGCGTTCA ACGCCAACCC CCGCGAGTCC AATGCCTTCG
AACGTCTCTC GCGACGTCTC GATGCGGGTC TCGTCACCGT CATCGGTGCC TTCGTTCTCG
CACCCGTTCG TGCAATCGAC GTCGCAGCCT CCGGCCGCGC CATCGGCTGC ATCAGCCGCC
GCTGATGCAG CACGCCGCGT CAACGTGGCC GACAAGCGCA TCATCAACGG CCAGACCGAC
GTCAACCAGC TGGTGCCGTT CAAGTACAAG TGGGCCTGGG AGAAGTACCT CGCCACCTGC
GCCAATCACT GGATGCCGCA AGAGGTCAAC ATGTCGCGCG ACATCGCGAC CTGGAAGGAC
CCCAATGGCC TGACCGATGA CGAGCGTCGC CTCATCAAGC GCAACCTCGG CTTCTTCGTC
ACCGCCGATT CGCTCGCGGC CAACAACATC ACGCTGGGCA CCTACCGCCA CATCACGGCG
CCCGAGTGCC GTCAGTTCCT GTTGCGCCAG GCCTTCGAAG AAGCGATCCA CACCCACGCC
TACCAGTACA TCGTCGAGTC GCTGGGCCTG GATGAAAGCG AGATCTTCAA CGCCTATCAC
GAGGTCGCGT CGATCCGCGA GAAGGACGAG TTCCTGATCC CGTACATCGA CGCGATCATG
GATCCGCACT TCAAGACCGG CACGCCCGAG AACGACCAGA CGCTGCTGAA GTCGCTGATC
GTCTTTGCCT GCCTGATGGA GGGCCTGTTC TTCTACGTCG GCTTCACGCA GATCCTGGCG
CTGGGTCGGC AGAACAAGAT GACCGGCGCG GCCGAGCAGT ACCAGTACAT CCTGCGTGAC
GAGTCGATGC ACTGCAATTT CGGCATCGAC CTGATCAACG CCATCAAGCT CGAGAACCCG
CACCTCTGGA CACCGGCGTT CAAGGCCGAG ATCAAGGCGC TGTTCCTGAA GGCCGTCGAG
CTTGAATACC GTTATGCCGA AGACACCATG CCGCGTGGCG TGCTCGGCCT CAATGCATCC
ATGTTCAAGG GCTATCTGCG CTACATCGCC AACCGGCGGG CCACGCAGAT CGGCCTTGAA
GAGCTCTTCC CGAACGAGGA AAACCCGTTC CCCTGGATGA GCGAAATGAT CGACCTGAAG
AAGGAGCGCA ATTTCTTCGA AACCCGCGTC ATCGAGTACC AGTCCGGCGG TGCGCTGTCC
TGGGACTGA
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| Protein sequence | MLVWEDTPRS TPTPASPMPS NVSRDVSMRV SSPSSVPSFS HPFVQSTSQP PAAPSAASAA
ADAARRVNVA DKRIINGQTD VNQLVPFKYK WAWEKYLATC ANHWMPQEVN MSRDIATWKD
PNGLTDDERR LIKRNLGFFV TADSLAANNI TLGTYRHITA PECRQFLLRQ AFEEAIHTHA
YQYIVESLGL DESEIFNAYH EVASIREKDE FLIPYIDAIM DPHFKTGTPE NDQTLLKSLI
VFACLMEGLF FYVGFTQILA LGRQNKMTGA AEQYQYILRD ESMHCNFGID LINAIKLENP
HLWTPAFKAE IKALFLKAVE LEYRYAEDTM PRGVLGLNAS MFKGYLRYIA NRRATQIGLE
ELFPNEENPF PWMSEMIDLK KERNFFETRV IEYQSGGALS WD
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