Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0363 |
Symbol | |
ID | 6162686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 397741 |
End bp | 398859 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663112 |
Product | hypothetical protein |
Protein accession | YP_001789403 |
Protein GI | 171057054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000011603 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTACCGAC TGCTCACGTC GCTCGAGGAG GCGATCGCCC TCGGCCGCAT CCCGGGCGAA GTGCCGTTCC TGCGCGCCGA GCGGGCGGTG GTCCATGCGC GGCTCGGTGA GCTGGAGCTG GCGCGGCGCG AGGTCGCGAT CCTGCGGGGG CTGTCCGAAA CGCAGACCAG TCCGGCCCTC AACGCATGGC TCTGGCTGGC CGAGGGATTG GCCGACTACT ACGAGAACCT GAGCCTGCGT GCGCGCGATC GCGTGCACCG TGCGATGGCG CTGGCGGCCT CGCTGAAGTC GGCGCGTGTG CATGCGCTGG CGGCGGCCTG GCTGGCGCAC ATGAGCTTCC GGGTGCACGA CTACACCGCC ACCGTGCAGC ACCTGGGCAC CGCGTTGCGC ATGGCCGCGG CCGAGCACCA TGCGGCCCGC TCGCGCGCCT GCATCGTCGT GGCCGGCGTC TACCACTACG CCGGGCGCGA GGACCTTGCG CAGCCCTGGT ACCTGCAGGC GCGAACCCAC GCCGCCACCG AGGGCGACGG CGCTGCGCTC AGTTCGATCA TGTACAACAT GGCGGCGCTG CGGGTGATGG GGGTGCGCCT GGCCGAGCGC TTCGGCGCGG CCGACGAGCT CAAGGCCAAA CGCGCGAGAC TCGGCACCGA ATCGTCGCTG TTCCTCGACC AGAGCGTGCG GACCAAGGCG CTCAGCAACC ACCCGCCGAT CCAGCGCGCG TTGATCCTGA CGGCACACGG CGAGTTTGCC GAGGCGCTCG GCCTCTACGA ACACCACCTG ACCGAAGCGC TTGCCGAAGG CCTGACCGGC TCCGAATGCC TGTTCCAGGC CGATCGGGCC TGGTGCCTGC TCGAACTCGG CCGCAGCGAC GAGGCCCTGA GCGCCGCACG GCTGGCCGAT TCAGCCTTCC TCTACGCCAC CGAGCCCGAA GAAGAGGCCA TCGCGCACGC GCTGCTGTCG ATGGTCTTCG AGCGCCTGGG TCTGCCCGAC GTGGCGCTCG TCCATGCCGA TGCGGCGCAG CGCATGCACG GGGTCTACCA GGCGCACTGT CGCACCCTGT TGCAGGCGAT GGACGCGGCG CAGCTCGAAA CCCTGCGCCT CGGCCCGATC GCGGCCTGA
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Protein sequence | MYRLLTSLEE AIALGRIPGE VPFLRAERAV VHARLGELEL ARREVAILRG LSETQTSPAL NAWLWLAEGL ADYYENLSLR ARDRVHRAMA LAASLKSARV HALAAAWLAH MSFRVHDYTA TVQHLGTALR MAAAEHHAAR SRACIVVAGV YHYAGREDLA QPWYLQARTH AATEGDGAAL SSIMYNMAAL RVMGVRLAER FGAADELKAK RARLGTESSL FLDQSVRTKA LSNHPPIQRA LILTAHGEFA EALGLYEHHL TEALAEGLTG SECLFQADRA WCLLELGRSD EALSAARLAD SAFLYATEPE EEAIAHALLS MVFERLGLPD VALVHADAAQ RMHGVYQAHC RTLLQAMDAA QLETLRLGPI AA
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