Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0331 |
Symbol | |
ID | 6160383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 359370 |
End bp | 359687 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641663080 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001789371 |
Protein GI | 171057022 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCATG TCTTCGACCT GCCCGGCGAG CTGACGATCT TCAGCGCCGC CGAGACCCGC ACCGCCCTGC TCGCCTGGCT GGGCGGCCTG CCGGCCGAGC CCGAGCAGCC GATCGAGCTC GACGCCGGCC AGGTGCTCGA CATCGACGGC GCCGGGGTGC AGCTGCTGTG CGCGTTCTCG GCGCTGATGT CGCGGCAAGA CCGGGCCTGG CGGCTGGTGT CGCCCGGCGA CACGCTGATC CAGCGCTGCC GCACGGCCGG CCTGTCGGCC TGGATCGATC GTCACGCCGG CCCGGCCGGG ACCGAGGCGC TGTCATGA
|
Protein sequence | MSHVFDLPGE LTIFSAAETR TALLAWLGGL PAEPEQPIEL DAGQVLDIDG AGVQLLCAFS ALMSRQDRAW RLVSPGDTLI QRCRTAGLSA WIDRHAGPAG TEALS
|
| |