Gene Lcho_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0331 
Symbol 
ID6160383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp359370 
End bp359687 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content74% 
IMG OID641663080 
Productanti-sigma-factor antagonist 
Protein accessionYP_001789371 
Protein GI171057022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG TCTTCGACCT GCCCGGCGAG CTGACGATCT TCAGCGCCGC CGAGACCCGC 
ACCGCCCTGC TCGCCTGGCT GGGCGGCCTG CCGGCCGAGC CCGAGCAGCC GATCGAGCTC
GACGCCGGCC AGGTGCTCGA CATCGACGGC GCCGGGGTGC AGCTGCTGTG CGCGTTCTCG
GCGCTGATGT CGCGGCAAGA CCGGGCCTGG CGGCTGGTGT CGCCCGGCGA CACGCTGATC
CAGCGCTGCC GCACGGCCGG CCTGTCGGCC TGGATCGATC GTCACGCCGG CCCGGCCGGG
ACCGAGGCGC TGTCATGA
 
Protein sequence
MSHVFDLPGE LTIFSAAETR TALLAWLGGL PAEPEQPIEL DAGQVLDIDG AGVQLLCAFS 
ALMSRQDRAW RLVSPGDTLI QRCRTAGLSA WIDRHAGPAG TEALS