Gene Lcho_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0327 
Symbol 
ID6160379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp353826 
End bp354329 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content73% 
IMG OID641663076 
Productcarbohydrate kinase 
Protein accessionYP_001789367 
Protein GI171057018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3265] Gluconate kinase 
TIGRFAM ID[TIGR01313] carbohydrate kinase, thermoresistant glucokinase family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTT CAACGGTCTT CATGGGCGTC GCCGGCTGCG GCAAGTCGAG CCTGGCTGCC 
GCGGTGGCGG CGGCCGAAGC GGCGCCACTG GTCGAGGGCG ACGATTTCCA CGGCCCGGCC 
AATCGCGACA AGATGAGCCG CGGCATCGCC CTCACCGACG CCGACCGCGA CGACTGGCTG 
GCGGCGCTGG CGGCGCAGTT GCGCGACGCG CCGCAAGGCA TCGTGCTGAC CTGCTCGGCG 
CTCAAGCGCA GCTACCGCGA GCGGCTGCGC AGCGCCGCGC CGGGCCTGCG CTTCGTGTTC 
CTCGACATCG ACCGCGACGC GGCGCTGGCC CGCGTGGCCG GCCGCAACGC CCATTTCTTT 
TCGGCGAGCC TGGTCGACAG CCAGTTCGCC ACCCTCGAAT CGCCGATCGG CGAACCCGGC 
GTGCTGCGCG TGGACGCCAC CGAAGCGCCG GCGCAACTGC AGGCCGAGGT CAGCGCCTGG 
CTGCACGACA GCGGCGCGGC GTGA
 
Protein sequence
MQVSTVFMGV AGCGKSSLAA AVAAAEAAPL VEGDDFHGPA NRDKMSRGIA LTDADRDDWL 
AALAAQLRDA PQGIVLTCSA LKRSYRERLR SAAPGLRFVF LDIDRDAALA RVAGRNAHFF 
SASLVDSQFA TLESPIGEPG VLRVDATEAP AQLQAEVSAW LHDSGAA