Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0308 |
Symbol | |
ID | 6163193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 333698 |
End bp | 334546 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641663057 |
Product | hypothetical protein |
Protein accession | YP_001789348 |
Protein GI | 171056999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGA ATCCCGCCAC CGAGTCCCCC GGACTCGCAA TCTCTGCCGC GCCGATGCCG TCGATCACCA CCACGCACCG GCGCCGCCTG CGTGCCATCT GGCGTTCGGC GGGCTGGCCC AGCCACGACA TCGTCGACGC CGAGCTGCTG GCGGCCGGCC TGCTCGAACG CCGCGAGGAC GTGAACGGCC GCACCACCTT GCGCGTCACC GACGCCGGCG TGCATGAACT GGTGCGCACG GCCGAAGGGC ATCGCAGCGC GCGCAGCGCC CACGACGCGC TGGTGTCGCG CGTGGCGGCC ACGCTGGCCC GCGACGGCCG CATCGCCTGG TGCGGCCTGA GCTTGCGGGC CTGGGTGACC ACGCCGCAGG CGGATCAGCC GGCCGACGCC GTGCCCGACG GGCGCTGGCA GATGGCGATG CCCGACGTCT ATTCGGTGCG CCAGACCAGC GTCGCCGCCT ATCTGCTGCC GGTGGTGCAC GAGATCAAGG TCAACCGGGC CGATCTGCTG GCCGATCTGC GCCAGGTGGC CAAGCGCACG GCGTACCGGC AGATGGCCGG CGCGCTGTTC TACGTGCTCG GCGAAGGGGT GGGCGATGTC GACGACATTC CGCCCGAATG TGGCGTCATC CGGGCCCACG GGGCGATCGG CTCGCATGCC CGCCACGCCG GCGAGCCGGT GCAGCTCGAG GTGCTGCGCA ATGCGCCGAC CCGCGCGATG GACGAGCCGG CCGGTCTGCC GTTCGCGATC TGGATGGCGC TGGCGCGGCT GACGCCGCAG GGCCTGCCGG ACGATCCGCA GCTGCCGCTG ATCGACGACG CGCCCTCGGT GCCGCCCGTC GACGCCTGA
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Protein sequence | MTSNPATESP GLAISAAPMP SITTTHRRRL RAIWRSAGWP SHDIVDAELL AAGLLERRED VNGRTTLRVT DAGVHELVRT AEGHRSARSA HDALVSRVAA TLARDGRIAW CGLSLRAWVT TPQADQPADA VPDGRWQMAM PDVYSVRQTS VAAYLLPVVH EIKVNRADLL ADLRQVAKRT AYRQMAGALF YVLGEGVGDV DDIPPECGVI RAHGAIGSHA RHAGEPVQLE VLRNAPTRAM DEPAGLPFAI WMALARLTPQ GLPDDPQLPL IDDAPSVPPV DA
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