Gene Lcho_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0308 
Symbol 
ID6163193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp333698 
End bp334546 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID641663057 
Producthypothetical protein 
Protein accessionYP_001789348 
Protein GI171056999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA ATCCCGCCAC CGAGTCCCCC GGACTCGCAA TCTCTGCCGC GCCGATGCCG 
TCGATCACCA CCACGCACCG GCGCCGCCTG CGTGCCATCT GGCGTTCGGC GGGCTGGCCC
AGCCACGACA TCGTCGACGC CGAGCTGCTG GCGGCCGGCC TGCTCGAACG CCGCGAGGAC
GTGAACGGCC GCACCACCTT GCGCGTCACC GACGCCGGCG TGCATGAACT GGTGCGCACG
GCCGAAGGGC ATCGCAGCGC GCGCAGCGCC CACGACGCGC TGGTGTCGCG CGTGGCGGCC
ACGCTGGCCC GCGACGGCCG CATCGCCTGG TGCGGCCTGA GCTTGCGGGC CTGGGTGACC
ACGCCGCAGG CGGATCAGCC GGCCGACGCC GTGCCCGACG GGCGCTGGCA GATGGCGATG
CCCGACGTCT ATTCGGTGCG CCAGACCAGC GTCGCCGCCT ATCTGCTGCC GGTGGTGCAC
GAGATCAAGG TCAACCGGGC CGATCTGCTG GCCGATCTGC GCCAGGTGGC CAAGCGCACG
GCGTACCGGC AGATGGCCGG CGCGCTGTTC TACGTGCTCG GCGAAGGGGT GGGCGATGTC
GACGACATTC CGCCCGAATG TGGCGTCATC CGGGCCCACG GGGCGATCGG CTCGCATGCC
CGCCACGCCG GCGAGCCGGT GCAGCTCGAG GTGCTGCGCA ATGCGCCGAC CCGCGCGATG
GACGAGCCGG CCGGTCTGCC GTTCGCGATC TGGATGGCGC TGGCGCGGCT GACGCCGCAG
GGCCTGCCGG ACGATCCGCA GCTGCCGCTG ATCGACGACG CGCCCTCGGT GCCGCCCGTC
GACGCCTGA
 
Protein sequence
MTSNPATESP GLAISAAPMP SITTTHRRRL RAIWRSAGWP SHDIVDAELL AAGLLERRED 
VNGRTTLRVT DAGVHELVRT AEGHRSARSA HDALVSRVAA TLARDGRIAW CGLSLRAWVT
TPQADQPADA VPDGRWQMAM PDVYSVRQTS VAAYLLPVVH EIKVNRADLL ADLRQVAKRT
AYRQMAGALF YVLGEGVGDV DDIPPECGVI RAHGAIGSHA RHAGEPVQLE VLRNAPTRAM
DEPAGLPFAI WMALARLTPQ GLPDDPQLPL IDDAPSVPPV DA