Gene Lcho_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0252 
Symbol 
ID6160528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp267893 
End bp268561 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content75% 
IMG OID641662996 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001789292 
Protein GI171056943 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00632373 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCGGA TCGTCATCCC CGCCAGCGCG ACGCATCCGC GCGCCTCGGC ACCCGCGCCG 
CAGCGGCCGC ACCCCACGCC GCTGCACGCC GACAACGTCA GCGTCGGCCT GTGGCTGCTG 
ATGGCGGTGA TCGGCGTGCT GTTCGCGCTG TTCGCGCTGG CCTACGTGAT GCGCATGGCG 
CAGGGCGATG CGTCGTCGAT CGCGCTGCCG TGGCTGCTCT GGCCCAGCAC CGCGCTGCTG 
CTGGCGGCCA GCGTGGCGAT GCAGTCGGCG CGCCGGGCTG TCCGGCGCGC GCAGCACCGG 
CCGGCCCGCC AGCGGCTGCT GGCCGCGGCA GCGCTGGCGT GCGGTTTCCT GGTCACGCAG 
TTCGGCGCCT GGCAGGCCCT GGCCGACGCC GCGGTGACCC CCGCCGGCAA CCCGGCGGCG 
AGCTTCTTCT ACCTGCTCAC CGCCCTGCAC GGCCTGCACG TGGCCGGCGG CCTGGTGGCG 
TGGGAGCACA GCTGGCGCGC CATCACGCAG GGCCGGCAAG ACGAGCCGGA CGGCGACTTG 
CGCGCCTCGG CCTGGCGCGT CGCGCTGTGC GCGCGCTACT GGCATTTCCT GCTGCTGGTG 
TGGCTGGGCC TGCTCGGCCT GCTGGGCGGC GTCACGCCCG AACTGGCGCG GGCGATCTGC 
GGCGTCTGA
 
Protein sequence
MSRIVIPASA THPRASAPAP QRPHPTPLHA DNVSVGLWLL MAVIGVLFAL FALAYVMRMA 
QGDASSIALP WLLWPSTALL LAASVAMQSA RRAVRRAQHR PARQRLLAAA ALACGFLVTQ 
FGAWQALADA AVTPAGNPAA SFFYLLTALH GLHVAGGLVA WEHSWRAITQ GRQDEPDGDL 
RASAWRVALC ARYWHFLLLV WLGLLGLLGG VTPELARAIC GV