| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0250 |
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| Symbol | |
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| ID | 6160538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 266729 |
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| End bp | 267115 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641662994 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789290 |
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| Protein GI | 171056941 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5605] Predicted small integral membrane protein |
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| TIGRFAM ID | [TIGR02229] caa(3)-type oxidase, subunit IV |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00978693 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGACAC ACCGCCGATC CCAAGCTCCC GGCGCGACCC GGTACCCGCC CGCCCCGCCG
ATTCGGCAGG CGCCGGTCGC GCACGCCGGC CAGCAGCACC CGATCGGGCT CTACCTGCGG
GTCTGGCTGC TGCTGTTCGT GCTCAGCACG CTGTCGTACG GGGTCGACTA CGTGCAGCTG
CAAGGCCTGC TGCGCTGGAG CCTGATCGTC ACGCTGATGC TGGCCAAGGC CGGCCTGATC
GTGGCCGTGT TCATGCACTT GGCGTGGGAA CGGCTGGCGC TGATCGTCGC CATCCTGCTG
CCACCGCTGG CAGTGCTGGT GCTGGTCGGG CTGATGTGGG CCGAAGGCCT GCACACCTTC
GTGACGCGCG GGTTGTTCTT CAACTGA
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| Protein sequence | MKTHRRSQAP GATRYPPAPP IRQAPVAHAG QQHPIGLYLR VWLLLFVLST LSYGVDYVQL
QGLLRWSLIV TLMLAKAGLI VAVFMHLAWE RLALIVAILL PPLAVLVLVG LMWAEGLHTF
VTRGLFFN
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