| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0206 |
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| Symbol | |
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| ID | 6162728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 216294 |
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| End bp | 217178 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662950 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001789246 |
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| Protein GI | 171056897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0399533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC CCCCCCGCCC CTCGCGCCCG GCCAGCTTCT GGCTGCTCGG CGCGGTCTTC
ACGGCCTTCG TGATCTTTCT CTACGGCCCG ATGCTCGCGA TCTTCGTGCT GAGCTTCCAG
GGCCCGGAGG GTGGCCTGAC CTTCCCGCTG CGCGGCGTCT CGCTGCACTG GTTCGCCAAG
CTCTGGGAAG GCATCGGCGT GATCGACATC GGCGCGGCGT TCCGGCGCTC GCTGGCGCTG
GGCGCGGTGG TCATGGCATT GACCGTGGGC TTCGCGCTGC TGGCGGGCCT GGCGTATCGC
AAGCGATTGC CCGGTGGCAC GCCGCTGTTC TACGTGGTGG TGGCGAGCCT GATCATGCCG
TCGATCATCG TCTCGCTGGG CATCGGCCTG ATGTTCCGGC TGCTCGACAC CGGCCTGAAA
GCCGGGCTCG AAGCCTGGTG GCCGGCCGCC GCCGAGACCT TCAACACCAC GCTCGGCCTG
TTCAGCTCGG GCCTGGGCGC GCAGCTGACC TGGACGCTGC CGTTCGGCCT CTTGATCATG
TTCGCGGTCT TCAACCGCTT CAACCCGGCG TATGAAGAGG CCGCGCGCGA CCTCGGCGCC
ACGCCGTGGC AGAGCTTCGT GCACGTGGTG CTGCCGCTGA TCGGGCCGAG CCTGGTCGGC
GTGGGCATGT TCGGTTTCAC GCTCAGCTGG GACGAGATCG CGCGCAGCTC GCAGGCGATG
GGCGACCTCA ACACCCTGCC GCTCGAACTG CAGGGCCTGA CGACCACCGT GACCACGCCG
GTGATCTACG CGCTCGGCAC GGTCACGACG GTGGTGTCGT TCCTGGTGAT GGGGCTGACG
CTGGCCACCG TCTGGCTGTG GCAAAGGCGA CAGCGCGCCG CCTGA
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| Protein sequence | MAKPPRPSRP ASFWLLGAVF TAFVIFLYGP MLAIFVLSFQ GPEGGLTFPL RGVSLHWFAK
LWEGIGVIDI GAAFRRSLAL GAVVMALTVG FALLAGLAYR KRLPGGTPLF YVVVASLIMP
SIIVSLGIGL MFRLLDTGLK AGLEAWWPAA AETFNTTLGL FSSGLGAQLT WTLPFGLLIM
FAVFNRFNPA YEEAARDLGA TPWQSFVHVV LPLIGPSLVG VGMFGFTLSW DEIARSSQAM
GDLNTLPLEL QGLTTTVTTP VIYALGTVTT VVSFLVMGLT LATVWLWQRR QRAA
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