| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0201 |
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| Symbol | |
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| ID | 6161410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 211171 |
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| End bp | 212769 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641662945 |
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| Product | SpoVR family protein |
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| Protein accession | YP_001789241 |
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| Protein GI | 171056892 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.262543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG AGACCTTGAT TGCGGCCCCT GAGGCGCCCC TGCGCGGCGC CGCGATGCGC
ACGCCGTTGC GTCAGCCGCT GCCCCTGTTG CAGCGCCCGA GCGAGCCGCT GCCGGCGCCC
AGCGACTGGA GCTTCGAGCT GATCGAGCGC TACCACACGG TCATCCGCCA GACCGCCGAA
CGCTTCGGCC TCGACACCTA TCCGAACCAG CTGGAGATCA TCACCGCCGA GCAGATGATG
GACGCCTACG CCAGCGTCGG CATGCCGGTC AACTACCGCC ACTGGAGCTA CGGCAAGGAG
TTCATCTCGA CCGAGAAGAA CTACAAGCGC GGCGCGATGG GCCTGGCCTA CGAGATCGTC
ATCAACTCCA ACCCCTGCAT CAGCTACCTG ATGGAGGAGA ACACGATGGC GATGCAGGCG
CTGGTGATCG CCCACGCCGC CTACGGCCAC AACAGTTTCT TCAAGGGTAA CTACCTGTTC
CGGATGTGGA CCGACGCGTC GTCGATCATC GACTACCTCG TCTACGCCAA GAACTACGTC
GCCGACTGCG AGGAGCGCCA CGGCATGGAC GCGGTCGAGA GTTTCCTCGA CAGCTGCCAC
GCGCTGATGA ACCACGGTGT CGACCGCTAC CGGCGGCCGA GCAAGAAGTC GCTGGCGCAG
GAACTGGCCG ACCGCAAGGA CCGCGAGGCC TACGCCCAGC AGCAGGTCAA CGACCTCTGG
CGCACCCTGC CGCGGCGCAC CGACAAGGCC GAGGAGGCCC AGGAGGCGCG CCGTTTCCCG
AGCGAGCCGC AGGAGAATCT GCTCTATTTC ATCGAGAAGA ACGCGCCGCT GCTCGAGCCC
TGGCAGCGCG AGATCGTGCG CATCGTTCGC AAGGTGGCGC AGTACTTCTA CCCGCAGCGC
CAGAGCCAGG TCATGAACGA GGGCTGGGCC ACCTTCTGGC ACCACAAGAT CCTCAACACC
ATGTACGACG ACGGCTACCT GACCGACGGC GTGATGATCG AATGGCTCAA GTCGCACACC
AACGTGGTCT ACCAGCCGCG CGTGGGTGAC AAGGGCTACA GCGGGATCAA CCCCTACGCG
CTCGGTTTCG CGATGTACAC CGACATCAAG CGCGTCTGCG AGAACCCGAC CGCCGAAGAC
CGCGAGTGGT TCCCCGACAT CGCCGGCTCC GACTGGCTGC CCACGCTCGA CCACGCGATG
CGCAACTACA AGGACGAGAG CTTCATCGGC CAGTTCCTGA GCCCCAAGCT GATGCGCGAC
CTGCGCCTGT TCGCGATCGT CGACGACGAC AAGAAGAGCG AGATCGAGGT GGCGGCGATC
CACGACGACG CCGGCTACCG CCGCGTGCGC GAGGCACTGT CGCACCAGTA CGACCTGGGC
CAGCGCGAGC CCAACATCCA GGTCTGGAAC GTCAACCTGC GCGGCGACCG CTCGCTGACG
CTGCGCCACT TCCAGCACAA CGACCGCCCG CTCGCCGACG GTGCGCAGGA GGTGCTGAAA
CACGTGGCGC GGCTGTGGGG CTTTGCCGTG CACCTGGAAA GCGTCAACGG CGCCGGCGAC
ATCGCCAAGC GCTGGACGGT GCCGGCACCG GCTCACTGA
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| Protein sequence | MNTETLIAAP EAPLRGAAMR TPLRQPLPLL QRPSEPLPAP SDWSFELIER YHTVIRQTAE
RFGLDTYPNQ LEIITAEQMM DAYASVGMPV NYRHWSYGKE FISTEKNYKR GAMGLAYEIV
INSNPCISYL MEENTMAMQA LVIAHAAYGH NSFFKGNYLF RMWTDASSII DYLVYAKNYV
ADCEERHGMD AVESFLDSCH ALMNHGVDRY RRPSKKSLAQ ELADRKDREA YAQQQVNDLW
RTLPRRTDKA EEAQEARRFP SEPQENLLYF IEKNAPLLEP WQREIVRIVR KVAQYFYPQR
QSQVMNEGWA TFWHHKILNT MYDDGYLTDG VMIEWLKSHT NVVYQPRVGD KGYSGINPYA
LGFAMYTDIK RVCENPTAED REWFPDIAGS DWLPTLDHAM RNYKDESFIG QFLSPKLMRD
LRLFAIVDDD KKSEIEVAAI HDDAGYRRVR EALSHQYDLG QREPNIQVWN VNLRGDRSLT
LRHFQHNDRP LADGAQEVLK HVARLWGFAV HLESVNGAGD IAKRWTVPAP AH
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