| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0189 |
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| Symbol | |
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| ID | 6161429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 198694 |
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| End bp | 199455 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662933 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789229 |
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| Protein GI | 171056880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATC TGCTGCTGGT GACGCTGGCC TCCGGGCTGG CCGGATTTGT CGATGCGATC
GTCGGCGGCG GCGGGCTGGT GCTGGTGCCG GCGCTGTTCA CGGTGTTTCC CGGCGCGCCG
CCGGCGACGC TGTTCGGCAC CAACAAGGCG GCGTCCGTGT GGGGGACGGC CTGGGCGGCG
CGGCTCTACG CGCGCCGTGT GCAGATGAAC TGGAGCACCC TCGGGCCGGC CGCGCTGGCG
GCCTTCCTCG GCGCGGCCGG TGGCGCCTGG CTGGTGATGC AGGTGCCGAC CACCGGGCTG
CGGCGTGCCT TGCCGTTCAT CCTGCTTGCT GTCCTGCTCT ACACGCTCGC ACGCAAGGAC
CTGGGTCGTG TGCATGCGCC GACGCTGAGC CGTCACGCCG AGCGCTGGAT CGGCGTTGCG
ATCGGCGCCG TGATCGGGTT CTACGACGGG TTTTTCGGGC CCGGCACCGG CAGTTTCTTT
GTCTTCCTGA TGGTGCGGTG GCTCGGCTAC GACTTCCTGC ATGCCTCGGC CGGCGCCAAG
CTGCTCAACG TGGCGACCAA CGTGGCCGCG CTGTGCCTGT TCGTCGGCAC CGGGCATGTC
ATGTGGCTGG TGGCTGCCTG CATGGCCGCT GCCAATGTGC TGGGCAGCTA CTTCGGCACG
CGCATGGCAC TGCGCCGTGG CGCGGGTTTC GTGCGCGGTG TCTTCATCGT TGTGGTCTCG
GTGCTGATCG TTCGCACCGG TTACGACGCC TGGCGCCTCT GA
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| Protein sequence | MVDLLLVTLA SGLAGFVDAI VGGGGLVLVP ALFTVFPGAP PATLFGTNKA ASVWGTAWAA
RLYARRVQMN WSTLGPAALA AFLGAAGGAW LVMQVPTTGL RRALPFILLA VLLYTLARKD
LGRVHAPTLS RHAERWIGVA IGAVIGFYDG FFGPGTGSFF VFLMVRWLGY DFLHASAGAK
LLNVATNVAA LCLFVGTGHV MWLVAACMAA ANVLGSYFGT RMALRRGAGF VRGVFIVVVS
VLIVRTGYDA WRL
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