| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0171 |
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| Symbol | |
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| ID | 6160656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 177806 |
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| End bp | 178756 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662915 |
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| Product | ferredoxin |
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| Protein accession | YP_001789211 |
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| Protein GI | 171056862 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGTT CCTCATTGAC CTTGCGCGTG GTCGCCGTCG ACGACATCGC GCCCACGCTG
CGCCACGTGC GGCTGGCCGC TGCCGACGGC GCGCTGCTGC CGCCCACCGG GGCCGGCGCG
CATGTGCAGT TCAGTCTGCC CGGCCAGGGC CGGCTGCACC GCAATGCCTA CTCGCTGGTG
AACGCGCCGG GCAGCCGCGC CCACTACGAC ATCATCGTGC GCCGCGTGCC GGCTTCGCGC
GGCGGATCGG CCGCGGTGCA CGAGCGCCTC AAGCCCGGCG ACAGCCTTGA GGCGCAGTGG
CCCGGCAACC TCTTCGCCCC CGTGCGCGGT GCCCGCCATC ACCTGATGAT TGCCGGCGGC
ATCGGCATCA CGCCCTTCCT GTCCTACCTG CAGGACCCGG GTGTGCGACA AGCCGGCTTT
GCGCTGCACG TGTGCTGCCG CGAAGCCGAG AAGGACGTCT TCGCGCCCTG GTTGCCGAGC
GCCGACGGCG TGGCCTTTCA TTGGGATGCC GACGGCCACC GGCTCGACAT CGCCGCGCTG
CTGGCCCGCC AGCCGGTGGG CACGCACCTG TACGTGTGCG GCCCCGCCGA CCTGAACGAG
TCGGTGATGA AGGCCGCGCA CGACGCCGGC TGGCCCGCCG ATCACCTGCA TACCGAGCAC
TTCGGCGGCG CGTCAGCCAC CGGCCGCGCC TTCGAGGCGG TGCTGCACAA GTCCGGCCTG
AGCGTGAATG TGGGCGAGGA CGAAAGCCTG CTCGAAGCGA TCGAACGTGC CGGCGTGGCC
GCACCCTGCC TGTGCCGTGG CGGCGCCTGC GGCGTGTGCA TCACCGGCGT GCTCGACGGC
GAGCCCGAAC ACCGCGACCA CTTCCTCAGC CCGGCCGAAC AAGTCGCCGG CCAGCTGATC
GCGCCCTGCG TGTCGCGCGC CCGCGGTGCC CGGCTGGTGC TCGATCTGTG A
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| Protein sequence | MIGSSLTLRV VAVDDIAPTL RHVRLAAADG ALLPPTGAGA HVQFSLPGQG RLHRNAYSLV
NAPGSRAHYD IIVRRVPASR GGSAAVHERL KPGDSLEAQW PGNLFAPVRG ARHHLMIAGG
IGITPFLSYL QDPGVRQAGF ALHVCCREAE KDVFAPWLPS ADGVAFHWDA DGHRLDIAAL
LARQPVGTHL YVCGPADLNE SVMKAAHDAG WPADHLHTEH FGGASATGRA FEAVLHKSGL
SVNVGEDESL LEAIERAGVA APCLCRGGAC GVCITGVLDG EPEHRDHFLS PAEQVAGQLI
APCVSRARGA RLVLDL
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