| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0153 |
|---|
| Symbol | |
|---|
| ID | 6163209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 157652 |
|---|
| End bp | 158707 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641662897 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001789193 |
|---|
| Protein GI | 171056844 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACACG CCTTGGTAGA ACCCGCCCGC GTCAGCGCTG ACGAACCGGA CGCGCAGGTG
CGCGTTGCGG TGGTCGGCGT GGGCGCCATC GGCGGCGTGT TCGCCGGCTG GCTGGGCTCG
CGCCTGCCGG CCGGGCGCAT CCGGCTGTCG GCATTGGCAC GCGGCGACAC CCTGCGCGCG
CTGCAGGCGC AGGGGCTGGT CCTGCAGGAG GCGGCAGGCC CCGTGCACGT GCCCTTGCAC
GCCAGCGACG ACCCGGCTGC GCTCGGTCCG CAGGACCTGG TGATCCTCGC CGTCAAGGGC
CCCGCGCTGG CCGCCGTGGC GCCGGCTGTG CGTGCGCTGC TGGCGCCGCA CACCACCGTG
CTGGTCGCCA TGAACGGCGT GCCGTGGTGG TTCTTCGACG GCCTGCCGGG GTCCTGCGAA
GGGCTGGCGC TGGACACGGT CGACCCGGGC GGCGTGATCG CTGCGGCCAT CCCCGGTCGC
CACGTGCTGG GCTGCGTGGT GCACGTCAGC GCCAGCGCGC CGGGGCCGGG CGAGGTCGCC
AACGTGCGGC ACAACAGCCT GATCATCGGC GAGCCCGCGG GCGGGCTTTC GCCGCGTGTC
GATGCCACCG CCGCGCTGCT CGCCGAGGCC GGTTTTGCCG TGACCCGCAG CGAGCGCATC
CAGCACGACA TCTGGTTCAA GCTGTGGGGC AACATGACCA TGAACCCGGT GTCGGCGCTG
ACCGGCGTCA CGTGCGACCG CATCCTCGAC GACCCGCTGG TGCGTGCCTT CTGCAGCGCC
GTGATGACCG AGGCCCAGGC CATCGGACGA CACATCGGCT GCGACATCGA CCAGCAGCCC
GACGACCGCC ACGCCATCAC CCGCGGCCTG GGCGCCTTCA AGACCTCGAT GCTGCAGGAC
CTGGAGGCCG GCCGCGCGCT GGAGATCGAC GGCCTGGTCG GCGCGGTGCG CGAGATCGGC
CAGCACCTGG GCCTGCACAC CCCCCACACC GATGCGCTGC TGGGCTTGGT GCGCCTGATG
GCGCAGGGCC GCGGCTTGTA TCCCGTCAGA ACCTGA
|
|---|
| Protein sequence | MTHALVEPAR VSADEPDAQV RVAVVGVGAI GGVFAGWLGS RLPAGRIRLS ALARGDTLRA
LQAQGLVLQE AAGPVHVPLH ASDDPAALGP QDLVILAVKG PALAAVAPAV RALLAPHTTV
LVAMNGVPWW FFDGLPGSCE GLALDTVDPG GVIAAAIPGR HVLGCVVHVS ASAPGPGEVA
NVRHNSLIIG EPAGGLSPRV DATAALLAEA GFAVTRSERI QHDIWFKLWG NMTMNPVSAL
TGVTCDRILD DPLVRAFCSA VMTEAQAIGR HIGCDIDQQP DDRHAITRGL GAFKTSMLQD
LEAGRALEID GLVGAVREIG QHLGLHTPHT DALLGLVRLM AQGRGLYPVR T
|
|---|
| |