Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1759 |
Symbol | |
ID | 4439024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1745271 |
End bp | 1745792 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673577 |
Product | transcriptional regulator |
Protein accession | YP_815558 |
Protein GI | 116630313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000118855 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAGCG AAACATTTAG AAATCTATCG GATGAAAAGA AAGAAAAAAT TGCAAAGGCA CTCTTGAAAG AATTTAGTAC TTATCCCTTG GCTAAGGCTC AAGTTGCGCG AATTGTAAAG GATGCAGGTA TTGCTAGGGG AGCATTTTAT AAATATTTTG GAGACTTAAA AGATGCGTAT GGTTATCTTT ATAGTTTAGC AATGAAAGAG GTCCATATGG GACCTCCAAC AAGGCTAAAA GAATTTGATC CAGAATTTTT TTATAAGATG ACTGTTGATT TTATTAATCA GACAGAAAAT AGTATTTATT TTGATCTGAT TAAACTGCAT CTTAGTCAAA ACCAGGCTTT TATCGGAGAA GATGAGAAGC AAAAAGATGC TTTTCTAAAT TTAAACTCTC AAGTTTGGGC TGCGATGGTT TTAACTCATG AAGCAATCGA TCTAGCCTTG TTTGATAAAA AGAATAAAGC TAAGATCCTT AAACGTTACC ATGAAAGTTT ATGTTTGTTG CAAAGAAAGT AG
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Protein sequence | MVSETFRNLS DEKKEKIAKA LLKEFSTYPL AKAQVARIVK DAGIARGAFY KYFGDLKDAY GYLYSLAMKE VHMGPPTRLK EFDPEFFYKM TVDFINQTEN SIYFDLIKLH LSQNQAFIGE DEKQKDAFLN LNSQVWAAMV LTHEAIDLAL FDKKNKAKIL KRYHESLCLL QRK
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