Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1728 |
Symbol | |
ID | 4439080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1712516 |
End bp | 1713274 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673546 |
Product | lactose transport regulator |
Protein accession | YP_815497 |
Protein GI | 116630282 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACTG AAGAACGTCA ACAAGCGATA GCAAGTTATA TTAATAATCA TAGTATCTGT CGTGTTAATG AATTATGTAA GTTAACTAAG TCGTCAGAGT CAACAATTCG CCGTGACCTC ATTGAATTAG AAAAACGTGG TGTAATTGTA CGTGTACATG GTGGTGCACG TTCGCTGCAA GATTATTCAC GCGATGTTGA ACAGCAGGTT AGATTTAATC TTAATGTTGA TAAGAAGCGT GAAATTGCTC GTTTTGCCGT AATCAACCAT ATTACTAGGG GAGATCATAT TTTCCTTGAT GCTGGAACGA CAACATATGA AATGGTGTCA TTTTTGCGAG AAATTAAGGA TTTACATGTG TTAACCAATG GTGTTGATAT TGCATTAGCA TGTTTAGAGA ATGGTATTCA GACTCGCTTG TTAGGGGGCG AGGCGAAGAT TGAAACACAT GCTGTGGTAG GTAACACTGC AATGAAACAA CTACAGGAAA TGAATTTATC TGTTTCATTT ATTGGTGCCA ACGGTTTAAC AGCAGAGGGG CAATTTACTA CTCCAGATCC AGCGGAAGCA GGGATAAAAA AGACTGCTAT TGAACAAGCA AAAGAAGCTT TTGTCTTAAT GGATAGTAGT AAAATTGGAG CGGCAAATTT TGCAAGTTTT GCACATATCA ATGAGGCAAT ACTCATCACT AACCATTTAA CAATAGGTAA GAAGAATCTT CTTCCTAAAC AAATCAGAGT TGAGGAGGCT CGGTCATGA
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Protein sequence | MLTEERQQAI ASYINNHSIC RVNELCKLTK SSESTIRRDL IELEKRGVIV RVHGGARSLQ DYSRDVEQQV RFNLNVDKKR EIARFAVINH ITRGDHIFLD AGTTTYEMVS FLREIKDLHV LTNGVDIALA CLENGIQTRL LGGEAKIETH AVVGNTAMKQ LQEMNLSVSF IGANGLTAEG QFTTPDPAEA GIKKTAIEQA KEAFVLMDSS KIGAANFASF AHINEAILIT NHLTIGKKNL LPKQIRVEEA RS
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