Gene LGAS_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1728 
Symbol 
ID4439080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1712516 
End bp1713274 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content38% 
IMG OID639673546 
Productlactose transport regulator 
Protein accessionYP_815497 
Protein GI116630282 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTG AAGAACGTCA ACAAGCGATA GCAAGTTATA TTAATAATCA TAGTATCTGT 
CGTGTTAATG AATTATGTAA GTTAACTAAG TCGTCAGAGT CAACAATTCG CCGTGACCTC
ATTGAATTAG AAAAACGTGG TGTAATTGTA CGTGTACATG GTGGTGCACG TTCGCTGCAA
GATTATTCAC GCGATGTTGA ACAGCAGGTT AGATTTAATC TTAATGTTGA TAAGAAGCGT
GAAATTGCTC GTTTTGCCGT AATCAACCAT ATTACTAGGG GAGATCATAT TTTCCTTGAT
GCTGGAACGA CAACATATGA AATGGTGTCA TTTTTGCGAG AAATTAAGGA TTTACATGTG
TTAACCAATG GTGTTGATAT TGCATTAGCA TGTTTAGAGA ATGGTATTCA GACTCGCTTG
TTAGGGGGCG AGGCGAAGAT TGAAACACAT GCTGTGGTAG GTAACACTGC AATGAAACAA
CTACAGGAAA TGAATTTATC TGTTTCATTT ATTGGTGCCA ACGGTTTAAC AGCAGAGGGG
CAATTTACTA CTCCAGATCC AGCGGAAGCA GGGATAAAAA AGACTGCTAT TGAACAAGCA
AAAGAAGCTT TTGTCTTAAT GGATAGTAGT AAAATTGGAG CGGCAAATTT TGCAAGTTTT
GCACATATCA ATGAGGCAAT ACTCATCACT AACCATTTAA CAATAGGTAA GAAGAATCTT
CTTCCTAAAC AAATCAGAGT TGAGGAGGCT CGGTCATGA
 
Protein sequence
MLTEERQQAI ASYINNHSIC RVNELCKLTK SSESTIRRDL IELEKRGVIV RVHGGARSLQ 
DYSRDVEQQV RFNLNVDKKR EIARFAVINH ITRGDHIFLD AGTTTYEMVS FLREIKDLHV
LTNGVDIALA CLENGIQTRL LGGEAKIETH AVVGNTAMKQ LQEMNLSVSF IGANGLTAEG
QFTTPDPAEA GIKKTAIEQA KEAFVLMDSS KIGAANFASF AHINEAILIT NHLTIGKKNL
LPKQIRVEEA RS