Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1702 |
Symbol | |
ID | 4439089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1684977 |
End bp | 1686509 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639673520 |
Product | hypothetical protein |
Protein accession | YP_815450 |
Protein GI | 116630256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0154146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000000000769377 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA GGCTACAAAC ATTCTTATTT TGGTTTATCT TAATCCAACC ATTTCTAGAT ATTTATTGGT TATCAAGACC ACCACTTCTA AAATTCTCAA TTCCATCGAT TTTGAGAGTT TTAGGAGTTT TTATTGCCAT TATTTTATTT TTTAGCATCA AAAATAATTG GCAAAGATTA AAAAAGCAAT GGTGGATTAT TACTTATATT GCAACTTTAA TCCTCTATTC GATTTGCCAT TTATTCTCTG TTAAAAACTT TACTGGGGTA GATCCAACAA GCTTTGGCTA TTCAGCAAAA GTTGAAATCT TCTACTTAAT TCGAGCTTGT CTACCCTTGA TAGTTATTTA CATCACTTCA TACAGTGATT TTAAAACTAA ATACTTTTTC AGAGTAATTC AAGCAATTTC GGGTTTATAT TCCTTAACGA TTGTCATTTC AAATCTCTTC GTTTTTTCGC TAACTTCATA TCATACTACA GAAGCTAAAC GAATCAGTGC CAATATTTTT TCTTGGTTTA CTCAAACGAA TTATCCTTTT AACGCTTTAG CATCTAAGGG AATTTTTTTT CAAGCTAATA CTTTATCAGC TATTTTATTC ATGATTATGC CGATCATGCT CTATATTCTT TACAAAGAGT TTAACCTCTT AAATATAGTG CTAGTTAGTG TACAAGCCTT AGCAATGTTA ATGCTAGGAA CAAAGGTAGG AAACTTTGGC TTAATTATTA GCTTAGTAAT TTTCTTAATC ACTTTCTTAT TCCATAGTTT GATTTTGAAA AATACCAAAT TTTCAGCCAA ATTTCTAATT ACGTTGATCT GCATCTTAGC TGCCTCCAGT GCTATTTTTC CTTATAGTCC AACACTTAGA AGGTCTTCGC TTGAAAATGG AGTAGCTCAA AAAAGAAGTA ATCTTGGCGA TAAAAATAGA CTCGATCAAG AGCTCGACTC TGGATTAAAA AGATATAAAG GGCAAAAACA AGCAGAATAT CTAAAAGATT TTATTAAGAA AAATTATTGG GTTTACTCTT TAAAACATGA TTTAGTTTTA GATCATTATT CCTATCAAAA TGATCCCTAT TATTGGCTGG ACGTCATGAA AAGGCCAGCT GCTGAACGAT TAAATTATCG ACATCTTGAA CAAGATATTC TTAGTCGCGT CATGAATAAT GATAAAAATA AACTCAATAA ACTTTTTGGT ATTTCCTTTA GCCGTGAAAA TAACATTGCT CCGCTAGAGC GTGACTTTTT AGCGCAGTAT TATTCAATGG GATTACTGGG AACAATCTTG TTAACAATAA TTTATATATT CGTTCTGGGC TATGGAATCT TTTACTGGCT AGTCAATAAA AATTCAAAAA CTTTATTAAT CTCTTCCCTA CTTTTATCCG GTGGCTTCAT TCTATTCGCT GCCTTTTATG CAGGCAATGT TCTTGAATAC TTATCAGCAA CATTAGTAAT GGCATTTATT TTGGGATTTT TATTACAAAA TATTCGATAT AGCAAAACAT CAAAATATCT AGTAAAGAAA TAA
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Protein sequence | MKKRLQTFLF WFILIQPFLD IYWLSRPPLL KFSIPSILRV LGVFIAIILF FSIKNNWQRL KKQWWIITYI ATLILYSICH LFSVKNFTGV DPTSFGYSAK VEIFYLIRAC LPLIVIYITS YSDFKTKYFF RVIQAISGLY SLTIVISNLF VFSLTSYHTT EAKRISANIF SWFTQTNYPF NALASKGIFF QANTLSAILF MIMPIMLYIL YKEFNLLNIV LVSVQALAML MLGTKVGNFG LIISLVIFLI TFLFHSLILK NTKFSAKFLI TLICILAASS AIFPYSPTLR RSSLENGVAQ KRSNLGDKNR LDQELDSGLK RYKGQKQAEY LKDFIKKNYW VYSLKHDLVL DHYSYQNDPY YWLDVMKRPA AERLNYRHLE QDILSRVMNN DKNKLNKLFG ISFSRENNIA PLERDFLAQY YSMGLLGTIL LTIIYIFVLG YGIFYWLVNK NSKTLLISSL LLSGGFILFA AFYAGNVLEY LSATLVMAFI LGFLLQNIRY SKTSKYLVKK
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