Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1670 |
Symbol | |
ID | 4439781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1644566 |
End bp | 1645444 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673492 |
Product | transcriptional antiterminator |
Protein accession | YP_815400 |
Protein GI | 116630228 |
COG category | [K] Transcription |
COG ID | [COG3711] Transcriptional antiterminator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0701104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAGCTT TTTTCTATAT AAAGGTGATT CGTCGGATGA TATTTCTTAA AACATTTAAC AATAGTGCAG CCTTGGTGCA GGACGATCAA GGCCAAGAAC AAGTAGTCCT GGGCAAAGGC GTGGGCTTTG GCTTAAAGAA AGGCGATAAG ATTGATGAGA GCAAAATTGA AAGGCGGTTT ACTGCTACTT CTCATCAAGA TGAAGTCAAT CAAGTTAAAG AGATCAATGC TTCAACCATC GATTTAACCA ATAAGGTGAT CCAGATGGTG GAGCCACTTT TAAATGTGAA GTTTAATGAT TTTCAATACT TAGCCTTAGC TGACCATATT GACTTTGCTC TTTCCAGAAC TGAAGATCAT ATTGATATGA GTGCTGCTAA TACACGTTGG GAAGTTAAGA ATCTTTTTCC TAAGGAGTAT AAGATTAGTG AAAGGGTCAT TGCTTTAATT AATAAAGAAA TGAAGGTTAA CTTGCCACCA AGTGAAAGTA TTTTTATGAC TTATCACTTC GTTAATGCAG CTTCTGATAA TGATCAAGTT CAAGAAACGG TTGAGATTAC TGAGTTGATT AGCGGAATTA TTGATATTAT TCAGTATCAA TACCAAATGA CTTTAGATAC AGAGTCATTT AATTATAGTC GCTTCATTAC TCACTTAAGA GTATTATTGG TAAGACTTTT AAGAAATAAG CATCAAAAAA GTGGCGAACT TGATGACTCG CTGCTGGCTT TTATGAAGAT TAAGTACAAT CATGCTTATG ATACGGCTGA GAGGATCGCA ACTTATTTAC ATAGTAAAAA GGGATGGACC TTAAATTCAG ATGATAAGTT CTATCTAGTT TTACACATTT GGCGTGTGAC AAACCGCCAA GAAAACTAA
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Protein sequence | MVAFFYIKVI RRMIFLKTFN NSAALVQDDQ GQEQVVLGKG VGFGLKKGDK IDESKIERRF TATSHQDEVN QVKEINASTI DLTNKVIQMV EPLLNVKFND FQYLALADHI DFALSRTEDH IDMSAANTRW EVKNLFPKEY KISERVIALI NKEMKVNLPP SESIFMTYHF VNAASDNDQV QETVEITELI SGIIDIIQYQ YQMTLDTESF NYSRFITHLR VLLVRLLRNK HQKSGELDDS LLAFMKIKYN HAYDTAERIA TYLHSKKGWT LNSDDKFYLV LHIWRVTNRQ EN
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