Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1485 |
Symbol | |
ID | 4439310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1476466 |
End bp | 1477644 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639673313 |
Product | phage phi-C31 gp36 major capsid-like protein |
Protein accession | YP_815279 |
Protein GI | 116630107 |
COG category | [R] General function prediction only |
COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 145 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 129 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA TTACTGAATT ACAAGAAAAG CGTGCCCGTA TTTGGAAACA AGCAAAGGAT TTCCTAAATG CTAAGCAAAA GGAATCAGAT GTACTCTCAG CCGAAGACAA TGCCCGTTAT GAAAAGATGG AGCAAGAAGT TGTCGACTTA GGTAAGGAAA TCAATCGACG GCACAAGCAG GCAGAAATTG AAGTGGCACT GAACCAACCT ACCTGTAAGG CCCTTACTAA TTCCCCAACT GCTGATCAGC TACCAAAGAG ACAGGATGCT CATGCAAAAG ATTTCTGGAA AATGATGCGT GGACATGCCG TCGTGGATGC TCTTAAGGAA GGTGCGGACC CCGATGGTGG TTTCTTAGTG CCCGACGAAT TTGAAAACCA ACTTATCCAA AAGTTGCAAG AAGCAAACGT GCTGCGAACG ATCAGTCATG TCATCCAAAC CAATAGCGGC GAACACAAAA TTCCAGTGGT AGCCAGTGAA GGTACTGCAG CCTGGCTCGA AGAAGAAGCG GCCTACACAG AGTCCAACAC TCAATTTAGT CAGGTGTCAC TAGGCGCACA TAAGTTGGGG ACCCTGATCA AAGTATCAGA AGAATTACTA AACGATTCCG CATTTGATTT GATGTCTTAT CTCTCCGATG AATTTGGACG CCGACTCGGT AATGCTGAAG AACAGGCCTT TTTAACCGGT ACCGGTACTG GTCAACCTAC TGGTATCCTA ACCGACACTA ATGGCGCTTC AGCCGGATCC ACAGCTGCCA AGGCCGATGC GTTAACTTTT GATGATTTAA TTGACCTTTT CTATTCCTTA AAGGCGCCAT ATCGTCAAAA CGCTGTCTTT TTGATGAACG ATGATACCGT GAAAGCCATC CGCAAAATGA AAGATAAGAA CGACCAATAC ATTTGGCAAC CTTCCGTTCA GGTAGGCCAA CCAGACCGAA TTCTTAACTG TCCGGTTTAC ACTAGTCCAT TCATGCCGAC ATTGGCTGCT GCTAATAAGC CAGTTCTTTT CGGTGACTTT AACTACTACT GGATTGCAGA TCGAGAAGGA CGAACCTTCA AACGTCTGAA TGAACTTTAT GCCGTAACTG GTCAAGTTGG CTTCTTAGGC TCACAACGAG TTGACGGTAA AGTTATCCTA CCAGAAGCAA TTAAAACCTT GTCCATGGCT GCTAAATAG
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Protein sequence | MSKITELQEK RARIWKQAKD FLNAKQKESD VLSAEDNARY EKMEQEVVDL GKEINRRHKQ AEIEVALNQP TCKALTNSPT ADQLPKRQDA HAKDFWKMMR GHAVVDALKE GADPDGGFLV PDEFENQLIQ KLQEANVLRT ISHVIQTNSG EHKIPVVASE GTAAWLEEEA AYTESNTQFS QVSLGAHKLG TLIKVSEELL NDSAFDLMSY LSDEFGRRLG NAEEQAFLTG TGTGQPTGIL TDTNGASAGS TAAKADALTF DDLIDLFYSL KAPYRQNAVF LMNDDTVKAI RKMKDKNDQY IWQPSVQVGQ PDRILNCPVY TSPFMPTLAA ANKPVLFGDF NYYWIADREG RTFKRLNELY AVTGQVGFLG SQRVDGKVIL PEAIKTLSMA AK
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