Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1477 |
Symbol | |
ID | 4439337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1467693 |
End bp | 1469045 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639673306 |
Product | SNF2 family DNA/RNA helicase |
Protein accession | YP_815272 |
Protein GI | 116630100 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 149 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATACA AGCCGCATGA ATACCAACAA TACGCGACCA AGTTCATTCT GGAACATCCG GTAGCTGCAA TCTTACTTGA CATGGGTTTA GGTAAGAGTG TCATTACTCT GACGGCCATC AAGCAACTCA TCCATCAAGA TAAAGTTCAC CGGGTACTAG TTGTTGCTCC TCTGCGTGTT GCCAAGCAAA CCTGGCCGGA AGAAATCAAT AAGTGGGATC ACTTAAAAGA TTTAACTTAC TCAGTAATCA CTGGCAACAA AAGCCAACGG GTCAAGGCTG CCCAAAAAGA AGTCGATATC TACATCATTA ACCGAGAAAA CTTAAAATGG CTCATCGAAT CATCCATTCC ATTTGATTAC GACATGCTCG TCATTGATGA ACTGTCTAGC TTCAAGTCTT ATCGCTCCCA ACGCTTCAAA GCCTTAAAAC GAGTTCGACC GTTGATTAAA CGCATTGTGG GATTGACTGG TACTCCATCG TCCAACGGTT TGATGGATTT GTGGGCGGAG TTCCGGGTGC TGGATATGGG TAAACGTCTT GGTCGCTTCA TCTCATATTA CAGAGCAAAC TATTTTGACC CCGACAAGCG CAACATGTAT CAGGTGTTTA CTTACAAGCC AAAGCCAGGT GCAGAACAAA GTATTTACCG TGCTATTGAT GACATTACCA TTTCCATGAA GTCCAAGGAC TACTTGCAAC TACCACCCTT AACAATGAAC ACCGTGCCAG TAAAGATGAG TCCCAGCGAG CAGACCATTT ATGATGAATT AAATGCGCAG TTAGTGGTTT CCACCCAAGG TAAACAAATC GATGCCCTTA ACGCTGCTAG TCTTTCTAAT AAGCTTTGCC AGATGGCCAA CGGTTGTGTC TATGATGATC AGCAACAAGT GGTGCAAATC CATCAACGCA AACTAGACGC TCTAGAAGAT TTAGTTGAAG CCGCCAATGG CAAGCCGGTA CTCATTGCTT ACTGGTTCAA ACATGACCTA GCACAAATTA AACAACGCTT CCAGGTACGT GAGATTAAAA CCACTCAGGA CATTAACGAC TGGAACGCTG GTAAAATTCC ACTGGCTTTA ATTCACCCCG CTTCAGCCGG TCATGGTTTA AACTTGCAGG CTGGTGGCTC TACCTTAATC TGGTATGGTC TGACCTGGAG TCTGGAGCTT TACCAGCAAA CTAATGCCAG ACTATGGCGG CAAGGTCAGC AACAGCCTGT AGTAATCTAC CATCTCATTA CTGAAGGCAC TATCGATGAA AACATTATGA CAGCCTTAAA GCAAAAGGAT AAAACTCAGT TGGCTTTGAT TAATGCGGTG AAGGCTAACT TGAAAGGAAG TGTTGTAGCA TGA
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Protein sequence | MQYKPHEYQQ YATKFILEHP VAAILLDMGL GKSVITLTAI KQLIHQDKVH RVLVVAPLRV AKQTWPEEIN KWDHLKDLTY SVITGNKSQR VKAAQKEVDI YIINRENLKW LIESSIPFDY DMLVIDELSS FKSYRSQRFK ALKRVRPLIK RIVGLTGTPS SNGLMDLWAE FRVLDMGKRL GRFISYYRAN YFDPDKRNMY QVFTYKPKPG AEQSIYRAID DITISMKSKD YLQLPPLTMN TVPVKMSPSE QTIYDELNAQ LVVSTQGKQI DALNAASLSN KLCQMANGCV YDDQQQVVQI HQRKLDALED LVEAANGKPV LIAYWFKHDL AQIKQRFQVR EIKTTQDIND WNAGKIPLAL IHPASAGHGL NLQAGGSTLI WYGLTWSLEL YQQTNARLWR QGQQQPVVIY HLITEGTIDE NIMTALKQKD KTQLALINAV KANLKGSVVA
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