| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1352 |
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| Symbol | |
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| ID | 4439438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1350667 |
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| End bp | 1351566 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673185 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_815152 |
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| Protein GI | 116629980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000522959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATT TTAAATTAAA ATTTGAAAAT AAAACACCTC AAAAATTGGG GCGTTTTTTG
TTAAGAAATG GTTTTTCTAA AAGAGCTTTA ACTAATAGCC AGCATAATGG GGGAATGATT
TTAGTAAATC ATCATCGCCG TTATACTAGC TATCTTTTAC ATCCAGGGGA TGAAGTAATC
TTTATCTTAG GTGAAGAGAA GAAAAATCAA TGGCTAAAAC CATCTACTAA TCAACTTAAT
ATTGTTTTTG AACAGCATGA TTATTTAGTC GTAAATAAAG AAGCTGGCGT TTTGTCAATC
CCATCTCGCT ATGAAGATAA TGATGCAGTA GTCAACAGAT TAATATATTA TTTTCAAAAA
AATGGGCAGA AAGATCTGAA GCCACATGTT ATTACAAGAC TTGATCGTGA TACATCAGGA
TTAGTTTTAG TTGGAAAAAA TGCAGTTGCT CATGCTCGAT TTAGTGAGAT GGGAAAGGAT
TGTTTTATTA AGAAGTACCA TGCAATTGTG CATGGCAATT TTAGTAAAGA GCAAGAAACA
GGGACTATTG ATGCGCCAAT CGGTAAACTA GATGCTGGCG TTAAACGCGG AATAGTAGCT
AATGGTCAAC GCTCAATTAC AAAATACCGT GTTTTAGAGC AAGTTAATGG TGCGAGCTTA
GTTGAATTAC AGTTACTAAC TGGCCGAACC CATCAAATTA GAGTTCACAT GCAATACCTT
GGACATCCCT TGTATGGTGA TCCATTGTAT GGGATTAAAG ATAATTTTAA GCGACAAGCT
TTGAATTGTT TTTATCTTAA GTTTGATGAT CCTTTTTCTG AACTTAAGCA GGAAATTACT
ATTTCAGAAC CAGTTGATAT GAAATGTTTG TGGCAAAGCC TAATAAGTAA TAAATTATAA
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| Protein sequence | MQYFKLKFEN KTPQKLGRFL LRNGFSKRAL TNSQHNGGMI LVNHHRRYTS YLLHPGDEVI
FILGEEKKNQ WLKPSTNQLN IVFEQHDYLV VNKEAGVLSI PSRYEDNDAV VNRLIYYFQK
NGQKDLKPHV ITRLDRDTSG LVLVGKNAVA HARFSEMGKD CFIKKYHAIV HGNFSKEQET
GTIDAPIGKL DAGVKRGIVA NGQRSITKYR VLEQVNGASL VELQLLTGRT HQIRVHMQYL
GHPLYGDPLY GIKDNFKRQA LNCFYLKFDD PFSELKQEIT ISEPVDMKCL WQSLISNKL
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