Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1333 |
Symbol | |
ID | 4439454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1329432 |
End bp | 1330103 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639673166 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_815133 |
Protein GI | 116629961 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000118049 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 156 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAT GTCTACTGTG TAATTCTAAC TTTAGGAGAC AAATTAATTA CGAAAGAATT TTTTCATTTG CTAAACCTAA AGAAAAGTTT GCCTGTTCTG ATTGCTTACA AAAGTTTACT AAAAAGAGAG GTCTCGTATG TTCAGGCTGT AATAAAGAAA TAAATAAAAA AGAATTGTGC TCTGATTGTG TTATATGGCA ACAAAAATAC TCAGGCAATT TATTAGACAA TAAAGCTATA TATCAATATA ATGAAGCTTT TCATGATTTG ATGGTACAGT ATAAACGCTA TGGCGACTAT GTCTTGAGTC ATGTACTGGC TGAATTAGTT AATTCTTTGC CAAAAGCTGA TTATTATGTC CCGATTCCTA GTTCTCCCAG CCATTTACGA AAAAGAGGAT TTGAAACAAT TTCTTCTGTT TATCAAAATC TAGTTCCTTT GACAGATTTA TTGGTTAAGG CGGATACTAA AAAGGCTCAA GGTGAAAAGA ATAGACAAGA GCGGTTGTTA ACTAAGCAGA CATTTTCAGC AATTAGAAAC AAAAATGTCC GAGGAAAGAT TTTGTTGTTA GACGATATTT ATACAACGGG ACGGACATTA TATCATGCTC GGGATGCGTT ATTAGAAGCT TATCCTAATT GTAAAATAAA TAGTTTTACA ATTAGTAGAT AA
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Protein sequence | MSKCLLCNSN FRRQINYERI FSFAKPKEKF ACSDCLQKFT KKRGLVCSGC NKEINKKELC SDCVIWQQKY SGNLLDNKAI YQYNEAFHDL MVQYKRYGDY VLSHVLAELV NSLPKADYYV PIPSSPSHLR KRGFETISSV YQNLVPLTDL LVKADTKKAQ GEKNRQERLL TKQTFSAIRN KNVRGKILLL DDIYTTGRTL YHARDALLEA YPNCKINSFT ISR
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