Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1282 |
Symbol | |
ID | 4439506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1276316 |
End bp | 1277533 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639673115 |
Product | hypothetical protein |
Protein accession | YP_815083 |
Protein GI | 116629911 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000743125 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATG AAAAACTAAA AGAATTTTTC AATAAATTTC CTCATATTAA GGAAAATAAG CCTTTACAAA ATACTCTGAG CAAGAAAATC AACAACCTAA TAAAAAAAGA AATCCAACAT GGTGCAAGTC AAGTTGAAGC GGAACAGAAA GCACTTTTAA ATTTAACAGA TCTAGACACT CTATTATCAC AACTAAAAAA TTTAGAAGAA ACTGACTACA GTAAATATAA TGATTTCTTT GCTAAAATCT TTGATTCAAA ATTAGTTAAT GAATTAAAAC TTAAATTAAA TCAAATTGAT GAAATTCACC TTAATTACCG CTTGGGTGAT ATTTTAGTAT TACCCACTAA TTCATCAAAC TTAATTGTGC ATGATTTTAT GTCTAGAGAT ATTGAAAATC TTCATTCAAC GGTCGAAAAA ATTGGTAACG TCTTAAAAAT TACTCAAGGT CCACGTAAGC TGGTAGGAAT TTTCAAAAAT AAAACTTTAT TATTTTTACC TAAAAATTTT ACTGGCTTCC TAACAATCAG AAGTCAAAGT GGTGATATCT ATATTAATAA AGTTCCAAAT TATTGTATGC TGGATGTTAC TGCAGTTTCT GGCGATTTAT TATTGGCTCA TTCTAAACTT AAACGTGTTC AAGCAGACTT AAAGTCAGGC GACATTGCTG TTTCTAATAC ATCTGCAAAT GTATTTCACA TTAATGCTCA TTCTGGAATT CTAACTAGCG ATCATGTTTG TGCAAAAGAA GAGATTTCTT ATCATACAAG TAGTGGAAAT ATAGACTTAG AAAGTATTTC TACTAAAAAC TTTTTTATCG ATACTAAGAG TGGAAAAATT ACTATTAATG ACCTTAATAG CGAAAGAATG GATTTAGTTA CTGATACAGG AAATATGAGC TTAAATAAGG TTAACGGTAG CGGTGATATT AAGTCTGGAA TTGGGAAAAT ATCCTTATCA ATTGCTGATA AATCTAATTT TAATTTTTCA ATCACAAGTA AAGTTGGAAG TATCCGCGTA AATGTACCAA AGAAAGAATT ATTTAAATTC AAAATCAATA CTAAAAAAAT CGGCCCTACT GATCTTCCAC TTGACTCCAT TATTTATGGT AATAATGAAT ATGATGAAAT TGAAGGATAT GTTGGTAATG AAAATTCAAG TAACTCACTA ACGATCACAA GTGAAATTGG AAAAGTATCA ATTAAGAACG AAAATTAA
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Protein sequence | MIDEKLKEFF NKFPHIKENK PLQNTLSKKI NNLIKKEIQH GASQVEAEQK ALLNLTDLDT LLSQLKNLEE TDYSKYNDFF AKIFDSKLVN ELKLKLNQID EIHLNYRLGD ILVLPTNSSN LIVHDFMSRD IENLHSTVEK IGNVLKITQG PRKLVGIFKN KTLLFLPKNF TGFLTIRSQS GDIYINKVPN YCMLDVTAVS GDLLLAHSKL KRVQADLKSG DIAVSNTSAN VFHINAHSGI LTSDHVCAKE EISYHTSSGN IDLESISTKN FFIDTKSGKI TINDLNSERM DLVTDTGNMS LNKVNGSGDI KSGIGKISLS IADKSNFNFS ITSKVGSIRV NVPKKELFKF KINTKKIGPT DLPLDSIIYG NNEYDEIEGY VGNENSSNSL TITSEIGKVS IKNEN
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