| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1257 |
|---|
| Symbol | |
|---|
| ID | 4439515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1254136 |
|---|
| End bp | 1254738 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639673093 |
|---|
| Product | glycopeptide antibiotics resistance protein |
|---|
| Protein accession | YP_815061 |
|---|
| Protein GI | 116629889 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4767] Glycopeptide antibiotics resistance protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000512133 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTTT TACAACCCTT ATATGAATAT ATCTATCATC ATTATGCAGC ACATATTAAT
CATTTTGCCC TAATTAAGTT AATTTTGTAT AGCTTAGATA AGACAATTTT TTATTTTATT
ATCTTTGCAA TTATTCGTTT ATGTTGGCTC TTATTTATAA GACATCGAAG GACTTTGAAA
TCAGAAGCAT GCGTTTGGCT TTTTAGTTTT TATGTCATTT TATTATTGAT GCTTACGGTA
TTTAGAGACA CATATTTTCC ATGGCAGTTA ACTTTTAATT TCCATCGCAA TTTAGGTGAT
ATTAATCTAG TATTTATGAA AGAAACGCTT AAGTTAACTC AGGGACAGAG TATGCTGGAT
TTCTTCTATA ATTCACTTGG AAATATTCTA TGGTTCATTC CATTCGGTTT ATTATTTCCA
AAAATTATCC AGAAAAAAAG CATGCTTTTA ACGATTTTTT TCGGTGGCTG TCTTTCAGTT
TGTATTGAGG GATTACAATT TATTCTTGAA ACTGGTGTAA GTGATATAGA CGATGTCTTT
TTCAATGTTT GCGGTACGAT AATTGGTTTT ATAATATATC GAATTATTTA TCGATTCTTA
TAA
|
|---|
| Protein sequence | MLFLQPLYEY IYHHYAAHIN HFALIKLILY SLDKTIFYFI IFAIIRLCWL LFIRHRRTLK
SEACVWLFSF YVILLLMLTV FRDTYFPWQL TFNFHRNLGD INLVFMKETL KLTQGQSMLD
FFYNSLGNIL WFIPFGLLFP KIIQKKSMLL TIFFGGCLSV CIEGLQFILE TGVSDIDDVF
FNVCGTIIGF IIYRIIYRFL
|
|---|
| |