| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1194 |
|---|
| Symbol | |
|---|
| ID | 4439587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1194667 |
|---|
| End bp | 1195230 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639673031 |
|---|
| Product | NUDIX family hydrolase |
|---|
| Protein accession | YP_815001 |
|---|
| Protein GI | 116629829 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCTAA GAGAAACTGA AATCTCAAAC AAGCCTGTAT TCGAAGGTAG GCTTATCGAC
TTAAACGTTG AAACTATTAG TCTACCAAAT GGAAAGACAG CAACTCGTGA AATAGTTAAG
CATCCCGATG CTAGTGCAGC AATTGCAATT AATGATGAGA AAAAAATGCT TCTTGTGAAG
CAATGGCGTG AGCCTATCAA ACAATTAACT CTAGAAATTC CTGCAGGTTT AATTGACGAA
ACAGATGCAT CACCCCTTGA TGCAATGAAA AGAGAGTTAA ATGAAGAGGG CGGCTATAAG
GCAGAATATT GGGAAAAGGT AAGTGAATTT TATACTTCAG TTGGATTCTG TGATGAAAAA
ATTCATTTAT TCTATTGTGA TACTTTGTCA AAAATTGAGC ACAAACGTCC TCTTGATGAA
GATGAGTTTC TAACTCAAGA ATGGTACAGT CTTCCTGAGT TAAAACAATT AATTGCGTCA
GGCAAAATTA TGGATGCCAA GACTGTTATG GCAATTACAT TCTGGGAAAA TATGATTTTA
ACAGGAAACC AAAGTAATGA CTGA
|
|---|
| Protein sequence | MNLRETEISN KPVFEGRLID LNVETISLPN GKTATREIVK HPDASAAIAI NDEKKMLLVK
QWREPIKQLT LEIPAGLIDE TDASPLDAMK RELNEEGGYK AEYWEKVSEF YTSVGFCDEK
IHLFYCDTLS KIEHKRPLDE DEFLTQEWYS LPELKQLIAS GKIMDAKTVM AITFWENMIL
TGNQSND
|
|---|
| |