Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1170 |
Symbol | |
ID | 4439633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1170915 |
End bp | 1172690 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673007 |
Product | metallo-beta-lactamase superfamily hydrolase |
Protein accession | YP_814977 |
Protein GI | 116629805 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.811184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000000000102391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACAAA AGATTAAGAT AATGATCTTG GGTGGCGCAC GTGAAAATGG TAAAAACATG TACGCTGTTC AAGTAGAAGA CGAAATTTTT ATTATGGATG CAGGTTTGAA GTATCCTGAT TCATCTTTAC TCGGAATTGA TGTCGTAATT CCTGACTTGG ATTTCTTCCG TGATTATGGC GATAAAATTG CTGGTATCTT TTTAACACAT GGTCATGCTG ATTCAATCGG CGCTTTACCT TATATCTTAC GAGACTATGA TATTCCAGTC TTTGGTTCAA AATTAACGAT CGAATTAGCT AAGATTGCTG TTCAACGTGA AAATAGACGT CGTAAAAATG ACTTATTCCA TGTTATTGAT GCGGATACAG AAATTGAATT TAAGAATGCA AATGTATCTT TCTTTAAGAC TACTCACTCA ATTCCAGATT CTTTAGGGAT TGATATTTCT ACTAAAGAAG GAGAAATTGT TTACACTGGG GACTTTAAGT TTGATCCATC TGCAAAAGAA GGTTTCAGAA CTGATTTTGT TCGCTTGTCT GAAATTGCAC AAAAAGGTGT TTTAGCACTA CTTAGTGATT CAACTAACGC TGAAGCAAAC TTCCCAAATG ATCGTCAAAC TAGTATTGAA AAGTATATTT TTAATATATT TGAAAATTAC GAGGGTCGTA TTATCGCAGC AGCCAAAGCA TCAAATATTG TCCGTGTTCA AGAAATTTTT CAAGCAGCAG CAGCTACTGG AAGACACGTT TTCTTAACTG GTAGAGATGC AGGTAAGATT GTCTACACTG CAATGAAATT AGGCTACTTA AATGTTCCTA AGGGCTTATT AGTTCACAGT AAGGATTTAA AGAAGATTCC TGATAAAGAA TTGGTGATCT TAGAAACAGG TCGGATGGGT GAACCGCTTA AGTCACTTCA GAAGATGGCA ACTAACCGCC ACCGCATGAT TAAAATTAAG AAGGGCGACT TGGTATTTAT TGCTACTACC CCTTCTCACT CAGTTGAAAC GATGGTTGCT CAGACAAGCG ACATGATTTA TCGTGCAGGT GGTACTGTTA AAGAGCTGGG CCGAGATAAG CATACTAGTG GACATGCAAC TGGTCGTGAT TTGCAATTAT TAATTGACAC ACTAAAACCT AAGTTTTTAA TTCCAGTTAT CGGTGAATAT CGTTTGCTTG AAATTCATAA AGATTTAGCA ATTGAAGCTG GAATGAATAA AAAAGATATT TTCTTACCAC ATAATGGGGA TGCCTACGCT TTAGAAAAAG GCCGTTTCTA TCGTACAGAT GCTGTCCCAG GTGAAGATAT TATGATTGAT GGCTCTGGTG TCGGAGATGT TGGTAATATT GTTTTAAGAG ACCGTGAAGT TTTATCTGAT GATGGTGTCT TTATTGCTGC TGTTACTATT GATAGAAAGA AAAAGAAGAT CATTTCAGAA CCACGTGTTT CAACTAGAGG TTTTGTTTAC ATTAAAGCTA ACCATGCTTT GATGAATGGT GCTTCTGACG TAATCAAAGA AGCAGTTAAC AACAACTTTG AACACAAGAA GTTTGACTGG ACTGAATTAA AACAAGATGT CCGTAATGAT GTTGAAAAGT ATCTTTACAA GCAAACGGGA CGCCGTCCAG TTGTTCTACC AGTCGTAATG GAAGTTAACC AAAACAGACA CCGTGCAATG GCTAGACGAA ATAACCAAGA AAACAATTCA GAAAAGCGTC AAAATAGAAG AAATTATCAT AAGAAAGATT CAGAACAAAA GAAGGCAAAA GCATAA
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Protein sequence | MSQKIKIMIL GGARENGKNM YAVQVEDEIF IMDAGLKYPD SSLLGIDVVI PDLDFFRDYG DKIAGIFLTH GHADSIGALP YILRDYDIPV FGSKLTIELA KIAVQRENRR RKNDLFHVID ADTEIEFKNA NVSFFKTTHS IPDSLGIDIS TKEGEIVYTG DFKFDPSAKE GFRTDFVRLS EIAQKGVLAL LSDSTNAEAN FPNDRQTSIE KYIFNIFENY EGRIIAAAKA SNIVRVQEIF QAAAATGRHV FLTGRDAGKI VYTAMKLGYL NVPKGLLVHS KDLKKIPDKE LVILETGRMG EPLKSLQKMA TNRHRMIKIK KGDLVFIATT PSHSVETMVA QTSDMIYRAG GTVKELGRDK HTSGHATGRD LQLLIDTLKP KFLIPVIGEY RLLEIHKDLA IEAGMNKKDI FLPHNGDAYA LEKGRFYRTD AVPGEDIMID GSGVGDVGNI VLRDREVLSD DGVFIAAVTI DRKKKKIISE PRVSTRGFVY IKANHALMNG ASDVIKEAVN NNFEHKKFDW TELKQDVRND VEKYLYKQTG RRPVVLPVVM EVNQNRHRAM ARRNNQENNS EKRQNRRNYH KKDSEQKKAK A
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