Gene LGAS_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1152 
Symbol 
ID4439650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1154708 
End bp1155157 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content31% 
IMG OID639672989 
ProductUDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
Protein accessionYP_814959 
Protein GI116629787 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000725593 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000000000139047 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTTT GTTTAGTTGG TTCTAGTGGT GGACATTTAA CTCATCTTTA TATGTTAAAA 
CCATTTTGGC AGAATAAAGA TAGATTTTGG GTTACTTTTG ATAAAGAAGA TGCAAGAAGT
AAACTCAAAG GAGAGAAAAT GTATGGGTGT CACTATCCAA CAAATCGTAA TTTGAAAAAC
TTGATTCGTA ATACTTTTTT AGCAATTAAA GTGCTCCGTA AAGAACGTCC TGATGTAATT
ATTTCTAGTG GGGCTGCAGT AGCAGTTCCA TTTTTTTATA TCGGAAAATT GATGGGAGCA
AAAACCGTTT ACATTGAAGT TTTTGATAGA TATGATAAAC CAACAATTAC AGGAAAACTT
GTGTATCCTA TAACAGATAA GTTTATTGTT GAATGGGAAG AAATGAAGAA AGTTTATCCT
AAAGCAATTA ATTTAGGAAG TATTTTTTAA
 
Protein sequence
MKVCLVGSSG GHLTHLYMLK PFWQNKDRFW VTFDKEDARS KLKGEKMYGC HYPTNRNLKN 
LIRNTFLAIK VLRKERPDVI ISSGAAVAVP FFYIGKLMGA KTVYIEVFDR YDKPTITGKL
VYPITDKFIV EWEEMKKVYP KAINLGSIF